RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 CYP3A43Q9HB55 503 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 APOBEC3GQ9HC16 384 aaKnown RBP12.18□□□□□ -0.46
HSPG2-202ENST00000374676 NXF1Q9UBU9 619 aaKnown RBP12.18□□□□□ -0.46
HSPG2-202ENST00000374676 FBXL5Q9UKA1 691 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 CSPG5O95196 566 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 TPM2P07951 284 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 RPL17P18621 184 aaKnown RBP12.17□□□□□ -0.46
HSPG2-202ENST00000374676 WARSP23381 471 aaKnown RBP12.17□□□□□ -0.46
HSPG2-202ENST00000374676 KLRC2P26717 231 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 OR1D2P34982 312 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 CA8P35219 290 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 GNL1P36915 607 aaPredicted RBP12.17□□□□□ -0.46
HSPG2-202ENST00000374676 NRIP1P48552 1158 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 COPB1P53618 953 aaKnown RBP12.17□□□□□ -0.46
HSPG2-202ENST00000374676 HYAL1Q12794 435 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 KCNC3Q14003 757 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 RAB33AQ14088 237 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 COL19A1Q14993 1142 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 SPOPLQ6IQ16 392 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 LILRA6Q6PI73 481 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 GBP6Q6ZN66 633 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 APTXQ7Z2E3 356 aaKnown RBP12.17□□□□□ -0.46
HSPG2-202ENST00000374676 ADGRF2Q8IZF7 708 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 EFHBQ8N7U6 833 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 SLC22A17Q8WUG5 538 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 KBTBD7Q8WVZ9 684 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 TATDN2Q93075 761 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 RTP3Q9BQQ7 232 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 ACBD6Q9BR61 282 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 BCO2Q9BYV7 579 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 NIF3L1Q9GZT8 377 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 TAB2Q9NYJ8 693 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 POLIQ9UNA4 740 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 STXBP5LQ9Y2K9 1186 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 CDY1Q9Y6F8 540 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 PLXNA3P51805 1871 aa12.17□□□□□ -0.46
HSPG2-202ENST00000374676 GOLGA6L19H0YKK7 550 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 PER2O15055 1255 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 ADAM12O43184 909 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 ABLIM3O94929 683 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 ATP1A3P13637 1013 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 PCSK1P29120 753 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 ASPAP45381 313 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 TPM4P67936 248 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 GPR17Q13304 367 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 ADAM15Q13444 863 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 EXOC3L4Q17RC7 722 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 CTC1Q2NKJ3 1217 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 TPGS2Q68CL5 300 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 SMYD5Q6GMV2 418 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 TMEM184AQ6ZMB5 413 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 RBM23Q86U06 439 aaKnown RBP12.16□□□□□ -0.46
HSPG2-202ENST00000374676 LUZP1Q86V48 1076 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 OSTM1Q86WC4 334 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 TTC39CQ8N584 583 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 ZNF461Q8TAF7 563 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 HDAC7Q8WUI4 952 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 ELMO3Q96BJ8 720 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 NT5C1BQ96P26 610 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 MRPL45Q9BRJ2 306 aaKnown RBP12.16□□□□□ -0.46
HSPG2-202ENST00000374676 CRACR2AQ9BSW2 395 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 VPS16Q9H269 839 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 SNX25Q9H3E2 840 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 DDX43Q9NXZ2 648 aaKnown RBP12.16□□□□□ -0.46
HSPG2-202ENST00000374676 MAFFQ9ULX9 164 aa12.16□□□□□ -0.46
HSPG2-202ENST00000374676 REV3LO60673 3130 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 CLSTN1O94985 981 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 GLUD1P00367 558 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 TBXAS1P24557 533 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-202ENST00000374676 PON1P27169 355 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 GTF2F1P35269 517 aaKnown RBP eCLIP12.15□□□□□ -0.46
HSPG2-202ENST00000374676 CLCN4P51793 760 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 CDH8P55286 799 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 ROR1Q01973 937 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 INCA1Q0VD86 236 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 SMARCB1Q12824 385 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 RTL10Q7L3V2 364 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 UNC93AQ86WB7 457 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 PALB2Q86YC2 1186 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 DCP1BQ8IZD4 617 aaKnown RBP12.15□□□□□ -0.46
HSPG2-202ENST00000374676 MICALL1Q8N3F8 863 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 OR6B3Q8NGW1 331 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 OR10T2Q8NGX3 314 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 FAM81BQ96LP2 452 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 INTS2Q9H0H0 1204 aaKnown RBP12.15□□□□□ -0.46
HSPG2-202ENST00000374676 ZCWPW1Q9H0M4 648 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 SDCBP2Q9H190 292 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 PLEKHA4Q9H4M7 779 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 IGFLR1Q9H665 355 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 SMYD3Q9H7B4 428 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.15□□□□□ -0.467e-7■■■■■ 48.1
HSPG2-202ENST00000374676 GCNT4Q9P109 453 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 AFF4Q9UHB7 1163 aaKnown RBP12.15□□□□□ -0.46
HSPG2-202ENST00000374676 DPP7Q9UHL4 492 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 CDH9Q9ULB4 789 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 HCFC2Q9Y5Z7 792 aa12.15□□□□□ -0.46
HSPG2-202ENST00000374676 WDR27A2RRH5 827 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 LGALS16A8MUM7 142 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 PES1O00541 588 aaKnown RBP12.14□□□□□ -0.47
HSPG2-202ENST00000374676 TGM5O43548 720 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms