RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ZDHHC18Q9NUE0 388 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 NFS1Q9Y697 457 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 FRMPD3Q5JV73 1810 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 LRRC37A2A6NM11 1700 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 ZBTB42B2RXF5 422 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 INO80B-WBP1J3KQ70 363 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 DYNC1LI2O43237 492 aaPredicted RBP12.84□□□□□ -0.35
HMGCL-202ENST00000374487 PPFIA2O75334 1257 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 PPFIA4O75335 1185 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 CFHP08603 1231 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 NOMO3P69849 1222 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 TFAMQ00059 246 aaKnown RBP12.84□□□□□ -0.35
HMGCL-202ENST00000374487 PPP1R7Q15435 360 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 CYP1B1Q16678 543 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 SGO2Q562F6 1265 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 ODF2Q5BJF6 829 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 LLGL2Q6P1M3 1020 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.84□□□□□ -0.35
HMGCL-202ENST00000374487 FBXO25Q8TCJ0 367 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 TRAPPC12Q8WVT3 735 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 MAIP1Q8WWC4 291 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 ZNF668Q96K58 619 aaPredicted RBP12.84□□□□□ -0.35
HMGCL-202ENST00000374487 INO80BQ9C086 356 aaPredicted RBP12.84□□□□□ -0.35
HMGCL-202ENST00000374487 MTRF1LQ9UGC7 380 aaKnown RBP12.84□□□□□ -0.35
HMGCL-202ENST00000374487 RSPH14Q9UHP6 348 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 CNTN6Q9UQ52 1028 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 GNEQ9Y223 722 aaKnown RBP12.84□□□□□ -0.35
HMGCL-202ENST00000374487 EIF3HO15372 352 aaKnown RBP eCLIP12.84□□□□□ -0.35
HMGCL-202ENST00000374487 ZEB2O60315 1214 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 PROSCO94903 275 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 ECEL1O95672 775 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 ASS1P00966 412 aaKnown RBP12.84□□□□□ -0.35
HMGCL-202ENST00000374487 C6orf222P0C671 652 aaPredicted RBP12.84□□□□□ -0.35
HMGCL-202ENST00000374487 CD58P19256 250 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 HPDP32754 393 aaPredicted RBP12.84□□□□□ -0.35
HMGCL-202ENST00000374487 SSR1P43307 286 aaKnown RBP12.84□□□□□ -0.35
HMGCL-202ENST00000374487 KCNJ1P48048 391 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 FNTAP49354 379 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 MYL6P60660 151 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 MCL1Q07820 350 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 TTLL4Q14679 1199 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 SGSM1Q2NKQ1 1148 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 EFCAB12Q6NXP0 572 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 MMS22LQ6ZRQ5 1243 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 CCDC50Q8IVM0 306 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 THNSL1Q8IYQ7 743 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 ZNF606Q8WXB4 792 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 SCINQ9Y6U3 715 aa12.84□□□□□ -0.35
HMGCL-202ENST00000374487 IGKV6-21A0A0C4DH24 114 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 FSCN2O14926 492 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 FAM189A1O60320 539 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 HBP1O60381 514 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 TMEM191BP0C7N4 346 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 COL6A1P12109 1028 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 RPL21P46778 160 aaKnown RBP12.83□□□□□ -0.36
HMGCL-202ENST00000374487 PMS2P54278 862 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 EIF3BP55884 814 aaKnown RBP12.83□□□□□ -0.36
HMGCL-202ENST00000374487 OSTNP61366 133 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 PDCLQ13371 301 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 MAMLD1Q13495 774 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 KCNA10Q16322 511 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 LRRC26Q2I0M4 334 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 KRT71Q3SY84 523 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 ZNF568Q3ZCX4 644 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 SPDYCQ5MJ68 293 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 ATF7IP2Q5U623 682 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 CCDC62Q6P9F0 684 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 FOXR1Q6PIV2 292 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 MPZL3Q6UWV2 235 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 NECAB2Q7Z6G3 386 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 PHF13Q86YI8 300 aaPredicted RBP12.83□□□□□ -0.36
HMGCL-202ENST00000374487 ARFGAP2Q8N6H7 521 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 BCAS4Q8TDM0 211 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 C1orf54Q8WWF1 131 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 C11orf49Q9H6J7 331 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 LRRC19Q9H756 370 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 PARVAQ9NVD7 372 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 CPSF3Q9UKF6 684 aaKnown RBP12.83□□□□□ -0.36
HMGCL-202ENST00000374487 ACKR2O00590 384 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 TLR3O15455 904 aaKnown RBP12.83□□□□□ -0.36
HMGCL-202ENST00000374487 DUSP11O75319 330 aaKnown RBP12.83□□□□□ -0.36
HMGCL-202ENST00000374487 TNNC2P02585 160 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 C1QBPQ07021 282 aaKnown RBP12.83□□□□□ -0.36
HMGCL-202ENST00000374487 CALCOCO2Q13137 446 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 SNX1Q13596 522 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 SIX1Q15475 284 aaPredicted RBP12.83□□□□□ -0.36
HMGCL-202ENST00000374487 ZNF394Q53GI3 561 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 TSHZ1Q6ZSZ6 1077 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 TLK2Q86UE8 772 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 RHOT1Q8IXI2 618 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 C12orf50Q8NA57 414 aaPredicted RBP12.83□□□□□ -0.36
HMGCL-202ENST00000374487 DPF3Q92784 378 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 NIF3L1Q9GZT8 377 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 VTA1Q9NP79 307 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 GRHL1Q9NZI5 618 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 USTQ9Y2C2 406 aa12.83□□□□□ -0.36
HMGCL-202ENST00000374487 CLCN3P51790 818 aa12.82□□□□□ -0.36
HMGCL-202ENST00000374487 IGBP1P78318 339 aa12.82□□□□□ -0.36
HMGCL-202ENST00000374487 ZNF699Q32M78 642 aa12.82□□□□□ -0.36
HMGCL-202ENST00000374487 GNASQ5JWF2 1037 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms