RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 CCDC195A0A1B0GUA6 201 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 CCDC78A2IDD5 438 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 GTPBP10A4D1E9 387 aaKnown RBP8.22□□□□□ -1.09
HERC4-202ENST00000373700 BAG2O95816 211 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 PDGFRAP16234 1089 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 YBX3P16989 372 aaKnown RBP eCLIP8.22□□□□□ -1.09
HERC4-202ENST00000373700 SP2Q02086 613 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 SPIRE1Q08AE8 756 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 LAMC2Q13753 1193 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 DGKDQ16760 1214 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 TEX2Q8IWB9 1127 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 SCN4BQ8IWT1 228 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 DCLK2Q8N568 766 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 DNERQ8NFT8 737 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 EPS8L1Q8TE68 723 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 SREK1Q8WXA9 508 aaKnown RBP8.22□□□□□ -1.09
HERC4-202ENST00000373700 RAPGEF5Q92565 580 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 MAML1Q92585 1016 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 SEC16BQ96JE7 1060 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 DDX23Q9BUQ8 820 aaKnown RBP8.22□□□□□ -1.09
HERC4-202ENST00000373700 HAUS2Q9NVX0 235 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 NEU2Q9Y3R4 380 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 NR2E1Q9Y466 385 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 PPP2R3BQ9Y5P8 575 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 SLC26A4O43511 780 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 CREB3O43889 395 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 TOM1L1O75674 476 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 PGK1P00558 417 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 RPL21P46778 160 aaKnown RBP8.22□□□□□ -1.09
HERC4-202ENST00000373700 BCAR1P56945 870 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 TMEM132DQ14C87 1099 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 CCDC14Q49A88 953 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 ATP13A4Q4VNC1 1196 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 KCNV1Q6PIU1 500 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 RIOX2Q8IUF8 465 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 KIF2BQ8N4N8 673 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 MYH6P13533 1939 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 BTBD19C9JJ37 291 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 APRTP07741 180 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 RFC5P40937 340 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 NAMPTP43490 491 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 ARL4CP56559 192 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 EIF3EP60228 445 aaKnown RBP8.22□□□□□ -1.09
HERC4-202ENST00000373700 ITKQ08881 620 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 ZNF844Q08AG5 666 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 RFX8Q6ZV50 586 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 USP50Q70EL3 339 aaPredicted RBP8.22□□□□□ -1.09
HERC4-202ENST00000373700 SDCCAG8Q86SQ7 713 aaPredicted RBP8.22□□□□□ -1.09
HERC4-202ENST00000373700 EXOC8Q8IYI6 725 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 MTMR14Q8NCE2 650 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 OR5B17Q8NGF7 314 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 ATXN7L3BQ96GX2 97 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 CHST7Q9NS84 486 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 SAE1Q9UBE0 346 aaPredicted RBP8.22□□□□□ -1.09
HERC4-202ENST00000373700 FNDC3AQ9Y2H6 1198 aaKnown RBP8.22□□□□□ -1.09
HERC4-202ENST00000373700 TIMM13Q9Y5L4 95 aaPredicted RBP8.22□□□□□ -1.09
HERC4-202ENST00000373700 E2F8A0AVK6 867 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 SOWAHBA6NEL2 793 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 GLTPD2A6NH11 291 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 OGTO15294 1046 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 P4HA2O15460 535 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 HUS1O60921 280 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 UPP2O95045 317 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 SDC4P31431 198 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 ARL4AP40617 200 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 PSMD6Q15008 389 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 SURF1Q15526 300 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 LRRC34Q8IZ02 419 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 REPS2Q8NFH8 660 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 FEZF2Q8TBJ5 459 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 RAET1EQ8TD07 263 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 KCNV2Q8TDN2 545 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 TMEM121Q9BTD3 319 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 TRAIPQ9BWF2 469 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 TMBIM4Q9HC24 238 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.22□□□□□ -1.09
HERC4-202ENST00000373700 POLIQ9UNA4 740 aa8.22□□□□□ -1.09
HERC4-202ENST00000373700 MYH7P12883 1935 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 FAM107AO95990 144 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 SHBGP04278 402 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 STAG3L1P0CL83 205 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 YY1P25490 414 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 PTENP60484 403 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 NME3Q13232 169 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 CAPSQ13938 189 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 SPARCL1Q14515 664 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 HIF1AQ16665 826 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 EEF1DP3Q658K8 133 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 CPNE8Q86YQ8 564 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 KIAA0319LQ8IZA0 1049 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 DAW1Q8N136 415 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 SEMA4DQ92854 862 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 ATP2A3Q93084 1043 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 CAVIN3Q969G5 261 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 HPDLQ96IR7 371 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 TIPINQ9BVW5 301 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 CDC42EP4Q9H3Q1 356 aaKnown RBP8.21□□□□□ -1.09
HERC4-202ENST00000373700 RNPEPQ9H4A4 650 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 ETNK1Q9HBU6 452 aa8.21□□□□□ -1.09
HERC4-202ENST00000373700 CHMP2BQ9UQN3 213 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms