RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 MED7O43513 233 aa16.69■□□□□ 0.26
HDAC8-209ENST00000373589 VEGFBP49765 207 aa16.69■□□□□ 0.26
HDAC8-209ENST00000373589 PTPN11Q06124 597 aaPredicted RBP16.69■□□□□ 0.26
HDAC8-209ENST00000373589 MAMLD1Q13495 774 aa16.69■□□□□ 0.26
HDAC8-209ENST00000373589 GLE1Q53GS7 698 aaKnown RBP16.69■□□□□ 0.26
HDAC8-209ENST00000373589 GLRA4Q5JXX5 417 aa16.69■□□□□ 0.26
HDAC8-209ENST00000373589 C9orf57Q5W0N0 161 aa16.69■□□□□ 0.26
HDAC8-209ENST00000373589 C1orf131Q8NDD1 294 aaKnown RBP16.69■□□□□ 0.26
HDAC8-209ENST00000373589 RAET1EQ8TD07 263 aa16.69■□□□□ 0.26
HDAC8-209ENST00000373589 KRT35Q92764 455 aa16.69■□□□□ 0.26
HDAC8-209ENST00000373589 ST3GAL5Q9UNP4 418 aa16.69■□□□□ 0.26
HDAC8-209ENST00000373589 TCRBV5S1A1TA0A578 114 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 RPS6KA5O75582 802 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 CABYRO75952 493 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 MYCNP04198 464 aaPredicted RBP16.68■□□□□ 0.26
HDAC8-209ENST00000373589 CD19P15391 556 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 CTNNA2P26232 953 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 CTNNA1P35221 906 aaKnown RBP16.68■□□□□ 0.26
HDAC8-209ENST00000373589 TWF2Q6IBS0 349 aaKnown RBP16.68■□□□□ 0.26
HDAC8-209ENST00000373589 CCDC70Q6NSX1 233 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 DENND1BQ6P3S1 775 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 PHLDB2Q86SQ0 1253 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 RNF180Q86T96 592 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 CPNE8Q86YQ8 564 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 UBL4BQ8N7F7 174 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 ARRDC4Q8NCT1 418 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 RUBCNQ92622 972 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 TRIM7Q9C029 511 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 MRPL47Q9HD33 250 aaKnown RBP16.68■□□□□ 0.26
HDAC8-209ENST00000373589 CHST12Q9NRB3 414 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 KLK14Q9P0G3 267 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 PARP2Q9UGN5 583 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 SCINQ9Y6U3 715 aa16.68■□□□□ 0.26
HDAC8-209ENST00000373589 CCDC66A2RUB6 948 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 PIRO00625 290 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 TLR3O15455 904 aaKnown RBP16.67■□□□□ 0.26
HDAC8-209ENST00000373589 CD4P01730 458 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 CALB1P05937 261 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 CTSHP09668 335 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 MCM3P25205 808 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 MARCKSL1P49006 195 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 ORC1Q13415 861 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 PTGISQ16647 500 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 HDAC7Q8WUI4 952 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 RNPC3Q96LT9 517 aaKnown RBP16.67■□□□□ 0.26
HDAC8-209ENST00000373589 ARFGAP3Q9NP61 516 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 PARVAQ9NVD7 372 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 CEP83Q9Y592 693 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 PCDHA3Q9Y5H8 950 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 MYO1FO00160 1098 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 SPOPO43791 374 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 SEC31AO94979 1220 aaKnown RBP16.67■□□□□ 0.26
HDAC8-209ENST00000373589 VDRP11473 427 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 CYP3A5P20815 502 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 SLC1A1P43005 524 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 NDST1P52848 882 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 ACLYP53396 1101 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 ITGA7Q13683 1181 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 BEND6Q5SZJ8 279 aaPredicted RBP16.67■□□□□ 0.26
HDAC8-209ENST00000373589 RNF19AQ9NV58 838 aa16.67■□□□□ 0.26
HDAC8-209ENST00000373589 DMGDHQ9UI17 866 aaKnown RBP16.67■□□□□ 0.26
HDAC8-209ENST00000373589 PDCD11Q14690 1871 aaKnown RBP16.67■□□□□ 0.26
HDAC8-209ENST00000373589 BRCA2P51587 3418 aa16.66■□□□□ 0.26
HDAC8-209ENST00000373589 SCN1AP35498 2009 aa16.66■□□□□ 0.26
HDAC8-209ENST00000373589 XPOTO43592 962 aaKnown RBP16.66■□□□□ 0.26
HDAC8-209ENST00000373589 ERLIN1O75477 346 aa16.66■□□□□ 0.26
HDAC8-209ENST00000373589 PROSCO94903 275 aa16.66■□□□□ 0.26
HDAC8-209ENST00000373589 FGGP02679 453 aa16.66■□□□□ 0.26
HDAC8-209ENST00000373589 PTK7Q13308 1070 aa16.66■□□□□ 0.26
HDAC8-209ENST00000373589 CNGA2Q16280 664 aa16.66■□□□□ 0.26
HDAC8-209ENST00000373589 C8orf74Q6P047 294 aa16.66■□□□□ 0.26
HDAC8-209ENST00000373589 AGO3Q9H9G7 860 aaKnown RBP16.66■□□□□ 0.26
HDAC8-209ENST00000373589 CYTH4Q9UIA0 394 aa16.66■□□□□ 0.26
HDAC8-209ENST00000373589 KIAA1257Q9ULG3 409 aa16.66■□□□□ 0.26
HDAC8-209ENST00000373589 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.66■□□□□ 0.26
HDAC8-209ENST00000373589 SNX9Q9Y5X1 595 aa16.66■□□□□ 0.26
HDAC8-209ENST00000373589 CCDC188H7C350 402 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 O00370 1275 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 GPR182O15218 404 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 ATF7P17544 494 aaPredicted RBP16.65■□□□□ 0.26
HDAC8-209ENST00000373589 THPOP40225 353 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 SOX4Q06945 474 aaPredicted RBP16.65■□□□□ 0.26
HDAC8-209ENST00000373589 NFX1Q12986 1120 aaKnown RBP16.65■□□□□ 0.26
HDAC8-209ENST00000373589 ZNF211Q13398 564 aaPredicted RBP16.65■□□□□ 0.26
HDAC8-209ENST00000373589 CLUL1Q15846 466 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 LONRF2Q1L5Z9 754 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 TRIM71Q2Q1W2 868 aaKnown RBP16.65■□□□□ 0.26
HDAC8-209ENST00000373589 PTPN20Q4JDL3 420 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 LHX8Q68G74 356 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 ERICH1Q86X53 443 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 FEZF2Q8TBJ5 459 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 KRT12Q99456 494 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 NT5C1AQ9BXI3 368 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 AP1M1Q9BXS5 423 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 OSBPL7Q9BZF2 842 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 ERVK-5Q9HDB9 667 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 FAM105AQ9NUU6 356 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 STIM2Q9P246 746 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 CEP350Q5VT06 3117 aa16.65■□□□□ 0.26
HDAC8-209ENST00000373589 TMEM191CA6NGB0 347 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms