RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TCRBV5S1A1TA0A578 114 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 TTC4O95801 387 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 KRT1P04264 644 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 POTEJP0CG39 1038 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 SLC20A2Q08357 652 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 PLCB4Q15147 1175 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 CCNG2Q16589 344 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 MICALCLQ6ZW33 695 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 EXD1Q8NHP7 514 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 SLITRK1Q96PX8 696 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 CYTH4Q9UIA0 394 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 INO80B-WBP1J3KQ70 363 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 DNM1LO00429 736 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 NOP56O00567 594 aaKnown RBP25.22■■□□□ 1.63
CDK9-201ENST00000373264 OGTO15294 1046 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 ASPAP45381 313 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 MAPK6Q16659 721 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 P3H1Q32P28 736 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 DENND1BQ6P3S1 775 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 ZNF365Q70YC5 407 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 INO80BQ9C086 356 aaPredicted RBP25.22■■□□□ 1.63
CDK9-201ENST00000373264 NIF3L1Q9GZT8 377 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 XYLT2Q9H1B5 865 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 CSADQ9Y600 493 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 GOLGA8SH3BPF8 625 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 CDCA2Q69YH5 1023 aaPredicted RBP25.22■■□□□ 1.63
CDK9-201ENST00000373264 TRAIPQ9BWF2 469 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 PPP2R3BQ9Y5P8 575 aa25.22■■□□□ 1.63
CDK9-201ENST00000373264 CENPFP49454 3210 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 CXCL8P10145 99 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 KLRC2P26717 231 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 TRPC3Q13507 836 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 MPP2Q14168 576 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 CNGA2Q16280 664 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 DUOXA2Q1HG44 320 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 IER5Q5VY09 327 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 DNAJC24Q6P3W2 148 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 DCUN1D2Q6PH85 259 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 CACNA2D3Q8IZS8 1091 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 GRK7Q8WTQ7 553 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 ARHGEF2Q92974 986 aaKnown RBP25.21■■□□□ 1.63
CDK9-201ENST00000373264 SPATA33Q96N06 139 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 IP6K2Q9UHH9 426 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 ATXN2Q99700 1313 aaKnown RBP25.21■■□□□ 1.63
CDK9-201ENST00000373264 A0A0G2JMZ2 1700 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 LRRC37A2A6NM11 1700 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 KRT19P08727 400 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 IGBP1P78318 339 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 MCL1Q07820 350 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 SMTNL2Q2TAL5 461 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 ZNF699Q32M78 642 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 CYP4F22Q6NT55 531 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.21■■□□□ 1.63
CDK9-201ENST00000373264 SPATS2Q86XZ4 545 aaKnown RBP25.21■■□□□ 1.63
CDK9-201ENST00000373264 MAIP1Q8WWC4 291 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 CENPTQ96BT3 561 aa25.21■■□□□ 1.63
CDK9-201ENST00000373264 GH1P01241 217 aa25.2■■□□□ 1.62
CDK9-201ENST00000373264 EFNA5P52803 228 aa25.2■■□□□ 1.62
CDK9-201ENST00000373264 TMEM132AQ24JP5 1023 aa25.2■■□□□ 1.62
CDK9-201ENST00000373264 CELF3Q5SZQ8 465 aaKnown RBP25.2■■□□□ 1.62
CDK9-201ENST00000373264 GKAP1Q5VSY0 366 aaPredicted RBP25.2■■□□□ 1.62
CDK9-201ENST00000373264 HMGXB4Q9UGU5 601 aa25.2■■□□□ 1.62
CDK9-201ENST00000373264 LIASO43766 372 aa25.2■■□□□ 1.62
CDK9-201ENST00000373264 KCNT1Q5JUK3 1230 aa25.2■■□□□ 1.62
CDK9-201ENST00000373264 MFSD5Q6N075 450 aa25.2■■□□□ 1.62
CDK9-201ENST00000373264 KCNV1Q6PIU1 500 aa25.2■■□□□ 1.62
CDK9-201ENST00000373264 VSTM1Q6UX27 236 aa25.2■■□□□ 1.62
CDK9-201ENST00000373264 YTHDF3Q7Z739 585 aaKnown RBP25.2■■□□□ 1.62
CDK9-201ENST00000373264 ANKRD42Q8N9B4 389 aa25.2■■□□□ 1.62
CDK9-201ENST00000373264 RNPEPQ9H4A4 650 aa25.2■■□□□ 1.62
CDK9-201ENST00000373264 RBPJLQ9UBG7 517 aa25.2■■□□□ 1.62
CDK9-201ENST00000373264 VGLL3A8MV65 326 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 FASTKD3Q14CZ7 662 aaKnown RBP25.19■■□□□ 1.62
CDK9-201ENST00000373264 CCDC13Q8IYE1 715 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 JOSD2Q8TAC2 188 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 TMEM120BA0PK00 339 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 TGFB3P10600 412 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 CD19P15391 556 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 RFC1P35251 1148 aaPredicted RBP25.19■■□□□ 1.62
CDK9-201ENST00000373264 DYNLT1P63172 113 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 SGSM1Q2NKQ1 1148 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 PTPN20Q4JDL3 420 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 ATF7IP2Q5U623 682 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 CAPN12Q6ZSI9 719 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 ZBTB8OSQ8IWT0 167 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 TAB3Q8N5C8 712 aaPredicted RBP25.19■■□□□ 1.62
CDK9-201ENST00000373264 SDCBP2Q9H190 292 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 PTPRHQ9HD43 1115 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 ZNF148Q9UQR1 794 aa25.19■■□□□ 1.62
CDK9-201ENST00000373264 IGKV6-21A0A0C4DH24 114 aa25.18■■□□□ 1.62
CDK9-201ENST00000373264 FSBPO95073 299 aa25.18■■□□□ 1.62
CDK9-201ENST00000373264 NFICP08651 508 aa25.18■■□□□ 1.62
CDK9-201ENST00000373264 VIMP08670 466 aaKnown RBP25.18■■□□□ 1.62
CDK9-201ENST00000373264 SPOCD1Q6ZMY3 1216 aa25.18■■□□□ 1.62
CDK9-201ENST00000373264 CCDC121Q6ZUS5 278 aa25.18■■□□□ 1.62
CDK9-201ENST00000373264 SYDE1Q6ZW31 735 aaPredicted RBP25.18■■□□□ 1.62
CDK9-201ENST00000373264 KIAA0319LQ8IZA0 1049 aa25.18■■□□□ 1.62
CDK9-201ENST00000373264 ARFGAP1Q8N6T3 406 aa25.18■■□□□ 1.62
CDK9-201ENST00000373264 EMC1Q8N766 993 aa25.18■■□□□ 1.62
CDK9-201ENST00000373264 TWNKQ96RR1 684 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms