RNA–Protein interactions for RNA: ENST00000373104.5

CSF3R-204, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF3R, Length 2,953 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-204ENST00000373104 CENPKQ9BS16 269 aa13.17□□□□□ -0.3
CSF3R-204ENST00000373104 C10orf88Q9H8K7 445 aa13.17□□□□□ -0.3
CSF3R-204ENST00000373104 TUFT1Q9NNX1 390 aa13.17□□□□□ -0.3
CSF3R-204ENST00000373104 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.16□□□□□ -0.3
CSF3R-204ENST00000373104 A6NJR5 290 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 CIB2O75838 187 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 SLC1A1P43005 524 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 NSFP46459 744 aaKnown RBP13.16□□□□□ -0.3
CSF3R-204ENST00000373104 ARL4CP56559 192 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 MTMR2Q13614 643 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 TDRPQ86YL5 185 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 RELL1Q8IUW5 271 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 RHOT1Q8IXI2 618 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 DAW1Q8N136 415 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 TMEM121Q9BTD3 319 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 ROBO1Q9Y6N7 1651 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 ARFGEF1Q9Y6D6 1849 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 RIMBP2O15034 1052 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 LPXNO60711 386 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 ADRB2P07550 413 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 RXRBP28702 533 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 PSMC4P43686 418 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 CACNB3P54284 484 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 GRAPQ13588 217 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 CLEC16AQ2KHT3 1053 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 RIPOR1Q6ZS17 1223 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 CEP128Q6ZU80 1094 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 SLC9A9Q8IVB4 645 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.16□□□□□ -0.3
CSF3R-204ENST00000373104 GRAPLQ8TC17 118 aaPredicted RBP13.16□□□□□ -0.3
CSF3R-204ENST00000373104 ZNF398Q8TD17 642 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 PAFAH2Q99487 392 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 PREBQ9HCU5 417 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 PPARGC1AQ9UBK2 798 aaKnown RBP13.16□□□□□ -0.3
CSF3R-204ENST00000373104 MARCOQ9UEW3 520 aaPredicted RBP13.16□□□□□ -0.3
CSF3R-204ENST00000373104 SH3BP1Q9Y3L3 701 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 UMODL1Q5DID0 1318 aa13.16□□□□□ -0.3
CSF3R-204ENST00000373104 RNASEH1O60930 286 aaKnown RBP13.15□□□□□ -0.3
CSF3R-204ENST00000373104 HLA-DOAP06340 250 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 CYP3A4P08684 503 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 SPATA31D3P0C874 917 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 RARBP10826 455 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 SLC18A1P54219 525 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 GSTA3Q16772 222 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 SPATA31D4Q6ZUB0 917 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 TRIM74Q86UV6 250 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 TRIM73Q86UV7 250 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 RHPN2Q8IUC4 686 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 ARHGAP18Q8N392 663 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 NMD3Q96D46 503 aaKnown RBP13.15□□□□□ -0.3
CSF3R-204ENST00000373104 OXNAD1Q96HP4 312 aaPredicted RBP13.15□□□□□ -0.3
CSF3R-204ENST00000373104 ECSITQ9BQ95 431 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 MTO1Q9Y2Z2 717 aaKnown RBP13.15□□□□□ -0.3
CSF3R-204ENST00000373104 PLIN4Q96Q06 1357 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 TXNDC9O14530 226 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 GNPATO15228 680 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 P4HA2O15460 535 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 GRIN3BO60391 1043 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 ADRA2BP18089 450 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 ADSSP30520 456 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 PRELPP51888 382 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 AP2B1P63010 937 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 DEUP1Q05D60 604 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 HIF1AQ16665 826 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 KRT39Q6A163 491 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 RASSF3Q86WH2 238 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 SCUBE1Q8IWY4 988 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 RBM15BQ8NDT2 890 aaKnown RBP13.15□□□□□ -0.3
CSF3R-204ENST00000373104 HELQQ8TDG4 1101 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 DDX1Q92499 740 aaKnown RBP13.15□□□□□ -0.3
CSF3R-204ENST00000373104 HIC2Q96JB3 615 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 FAM210AQ96ND0 272 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 NR1H4Q96RI1 486 aaPredicted RBP13.15□□□□□ -0.3
CSF3R-204ENST00000373104 RANBP17Q9H2T7 1088 aaKnown RBP13.15□□□□□ -0.3
CSF3R-204ENST00000373104 EBF3Q9H4W6 596 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 TMEM206Q9H813 350 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 KCNK13Q9HB14 408 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 CHCHD3Q9NX63 227 aaKnown RBP13.15□□□□□ -0.3
CSF3R-204ENST00000373104 GALNT8Q9NY28 637 aa13.15□□□□□ -0.3
CSF3R-204ENST00000373104 A8MXQ7 604 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 SLC16A4O15374 487 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 MT-ND3P03897 115 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 GPX6P59796 221 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 NFX1Q12986 1120 aaKnown RBP13.14□□□□□ -0.31
CSF3R-204ENST00000373104 CDC16Q13042 620 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.14□□□□□ -0.31
CSF3R-204ENST00000373104 FAM182AQ5T1J6 154 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 SYCP2LQ5T4T6 812 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 PALM2Q8IXS6 379 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 ST13P4Q8IZP2 240 aaPredicted RBP13.14□□□□□ -0.31
CSF3R-204ENST00000373104 HIPK4Q8NE63 616 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 SKA1Q96BD8 255 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 ACCSQ96QU6 501 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 GINM1Q9NU53 330 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 ETNK2Q9NVF9 386 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 CLIC5Q9NZA1 410 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 SLC24A2Q9UI40 661 aa13.14□□□□□ -0.31
CSF3R-204ENST00000373104 GGA1Q9UJY5 639 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms