RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 CCDC159P0C7I6 412 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 TMEM253P0C7T8 217 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 LINC00116Q8NCU8 138 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 SLC39A10Q9ULF5 831 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 CCT8L1PA6NM43 557 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 STAMBPL1Q96FJ0 436 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 SBK1Q52WX2 424 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 DNAJC9Q8WXX5 260 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 FKBP9O95302 570 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 PKN3Q6P5Z2 889 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 FKBP9P1Q75LS8 142 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 ZNF513Q8N8E2 541 aaPredicted RBP25■■□□□ 1.59
RAPGEF1-203ENST00000372195 PLA2G12BQ9BX93 195 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 HNRNPH1P31943 449 aaKnown RBP25■■□□□ 1.59
RAPGEF1-203ENST00000372195 DNAL1Q4LDG9 190 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 ANKS1AQ92625 1134 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 STAU2Q9NUL3 570 aaKnown RBP eCLIP25■■□□□ 1.59
RAPGEF1-203ENST00000372195 TNS3Q68CZ2 1445 aa25■■□□□ 1.59
RAPGEF1-203ENST00000372195 RAP1GDS1P52306 607 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 TJAP1Q5JTD0 557 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 DENND5BQ6ZUT9 1274 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 SMAD5Q99717 465 aaKnown RBP24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 MXRA8Q9BRK3 442 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 YIPF2Q9BWQ6 316 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 DYRK4Q9NR20 520 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 CTCFP49711 727 aaPredicted RBP24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 FEZF2Q8TBJ5 459 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 BHMTQ93088 406 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 WNK4Q96J92 1243 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 MED15Q96RN5 788 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 ZNF70Q9UC06 446 aaPredicted RBP24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 DAB1O75553 588 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 NR3C2P08235 984 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 FAM117BQ6P1L5 589 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 SHCBP1Q8NEM2 672 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 VPS50Q96JG6 964 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 MOV10L1Q9BXT6 1211 aaKnown RBP24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 TMEM39BQ9GZU3 492 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 NPTXRO95502 500 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 SEMA3FQ13275 785 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 PLD3Q8IV08 490 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 CATSPER1Q8NEC5 780 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 ELMO3Q96BJ8 720 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 TRIM60Q495X7 471 aa24.99■■□□□ 1.59
RAPGEF1-203ENST00000372195 KIF1CO43896 1103 aaKnown RBP24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 FAM111AQ96PZ2 611 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 GPRC5CQ9NQ84 441 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 LATS2Q9NRM7 1088 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 KLK14Q9P0G3 267 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 CDV3Q9UKY7 258 aaKnown RBP24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 ITGB3P05106 788 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 SERPINB4P48594 390 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 KYAT1Q16773 422 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 PATL1Q86TB9 770 aaKnown RBP24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 E2F7Q96AV8 911 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 ABHD8Q96I13 439 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 TAAR1Q96RJ0 339 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 EXTL3O43909 919 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 TBC1D4O60343 1298 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 ARIH2O95376 493 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 AARS2Q5JTZ9 985 aaKnown RBP24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 NME5P56597 212 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 KCNT1Q5JUK3 1230 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 RBM46Q8TBY0 533 aaKnown RBP24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 DLGAP2Q9P1A6 1054 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 A2ML1A8K2U0 1454 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 SNRPAP09012 282 aaKnown RBP24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 SCFD1Q8WVM8 642 aa24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 TRIM45Q9H8W5 580 aaPredicted RBP24.98■■□□□ 1.59
RAPGEF1-203ENST00000372195 OVOS2A0A0G2JMS6 1433 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 OVOS2A0A0J9YW53 1432 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 VEPH1Q14D04 833 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 OVOS2Q6IE36 1432 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 TIPINQ9BVW5 301 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 KCNH7Q9NS40 1196 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 MTO1Q9Y2Z2 717 aaKnown RBP24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 ZNF263O14978 683 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 GEMIN4P57678 1058 aaKnown RBP24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 TWF1Q12792 350 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 POP1Q99575 1024 aaKnown RBP24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 NT5C1AQ9BXI3 368 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 CNOT7Q9UIV1 285 aaKnown RBP24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 GYS1P13807 737 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 NCAM1P13591 858 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 PON1P27169 355 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 RAP1GAPP47736 663 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 ELMSAN1Q6PJG2 1045 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 SGSM3Q96HU1 749 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 PAK5Q9P286 719 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 ABCA6Q8N139 1617 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 C5orf58C9J3I9 102 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 POLBP06746 335 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 SERPINB9P50453 376 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 C11orf96Q7Z7L8 435 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 MMGT1Q8N4V1 131 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 NSL1Q96IY1 281 aa24.97■■□□□ 1.59
RAPGEF1-203ENST00000372195 ATP6V1B1P15313 513 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 SERPINB5P36952 375 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 GLRA4Q5JXX5 417 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 TARS2Q9BW92 718 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms