RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 KLHL23Q8NBE8 558 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 STKLD1Q8NE28 680 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 CDCA5Q96FF9 252 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 A0A1B0GTH6 734 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 RHOBTB3O94955 611 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 KITP10721 976 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 HOXA10P31260 410 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 ALDH7A1P49419 539 aaKnown RBP13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 ALKBH8Q96BT7 664 aaKnown RBP13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 ASIC4Q96FT7 647 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 SUN2Q9UH99 717 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 PCSK1P29120 753 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 NPEPPSP55786 919 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 PCNX4Q63HM2 1172 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 AHI1Q8N157 1196 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 MED15Q96RN5 788 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 ZC3H4Q9UPT8 1303 aaKnown RBP13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 DFFAO00273 331 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 SNUPNO95149 360 aaKnown RBP13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 SUPT20HL2P0C7V6 817 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 YWHAHQ04917 246 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 LUZP2Q86TE4 346 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 CDKL3Q8IVW4 592 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 ASZ1Q8WWH4 475 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 STARD7Q9NQZ5 370 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 APEX2Q9UBZ4 518 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 CAB39Q9Y376 341 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 L3MBTL1Q9Y468 752 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 PCDHGA3Q9Y5H0 932 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 ENO4A6NNW6 628 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 GUCY1B2O75343 617 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 MGAT5BQ3V5L5 792 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 GLYCTKQ8IVS8 523 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 RHOT1Q8IXI2 618 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 DNERQ8NFT8 737 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 RFFLQ8WZ73 363 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 CCT8L2Q96SF2 557 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 COLEC11Q9BWP8 271 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 HPS5Q9UPZ3 1129 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 SNX5Q9Y5X3 404 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 SYCE1LA8MT33 242 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 PIK3R2O00459 728 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 FOXP2O15409 715 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 RPLP2P05387 115 aaKnown RBP13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 ZBTB18Q99592 522 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 EPAS1Q99814 870 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 ING2Q9H160 280 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 C17orf75Q9HAS0 396 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 TBC1D23Q9NUY8 699 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 DIAPH2O60879 1101 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 APOA4P06727 396 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 FMO5P49326 533 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 MAP3K10Q02779 954 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 TEX9Q8N6V9 391 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 WARS2Q9UGM6 360 aaKnown RBP13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 LSM1O15116 133 aaKnown RBP13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 ADCY3O60266 1144 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 BCAR1P56945 870 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 STAT4Q14765 748 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 CCNI2Q6ZMN8 369 aaPredicted RBP13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 DDX53Q86TM3 631 aaKnown RBP13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 ATP11CQ8NB49 1132 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 C18orf8Q96DM3 657 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 ZNF512Q96ME7 567 aaPredicted RBP13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 PRMT1Q99873 361 aaKnown RBP13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 SENP1Q9P0U3 644 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 TUBE1Q9UJT0 475 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 ARPC4-TTLL3A0A0A6YYG9 625 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 RTN2O75298 545 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 KRT20P35900 424 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 ZNF235Q14590 738 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 FBXW10Q5XX13 1052 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 TRIM59Q8IWR1 403 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 CATSPER1Q8NEC5 780 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 PITPNM2Q9BZ72 1349 aa13.94□□□□□ -0.18
RAPGEF1-201ENST00000372189 GOLGA8MH3BSY2 632 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 PNPLA4P41247 253 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 ROR1Q01973 937 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 PPATQ06203 517 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 FRA10AC1Q70Z53 315 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 BTBD6Q96KE9 485 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 DISP2A7MBM2 1401 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 CFAP69A5D8W1 941 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 SLC37A4O43826 429 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 SHMT1P34896 483 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 SREBF1P36956 1147 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 ALDH1A3P47895 512 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 HSD17B4P51659 736 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 ARHGDIAP52565 204 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 MOXD1Q6UVY6 613 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 ADSSL1Q8N142 457 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 CCDC195A0A1B0GUA6 201 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 DNAJC6O75061 913 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 TUBA1BP68363 451 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 PDIA2Q13087 525 aaKnown RBP13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 TMEM259Q4ZIN3 620 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 RARS2Q5T160 578 aaKnown RBP13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 AGBL2Q5U5Z8 902 aa13.93□□□□□ -0.18
RAPGEF1-201ENST00000372189 TUBA1AQ71U36 451 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms