RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 TAS2R42Q7RTR8 314 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 BAP1Q92560 729 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 E2F7Q96AV8 911 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 WRNIP1Q96S55 665 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 CSRNP1Q96S65 589 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 LRRC4CQ9HCJ2 640 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 MYO3AQ8NEV4 1616 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 CBFA2T3O75081 653 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 FOXN2P32314 431 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 OCRLQ01968 901 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 CDC16Q13042 620 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 EGFLAMQ63HQ2 1017 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 JADE1Q6IE81 842 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 TRAF7Q6Q0C0 670 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 AMIGO2Q86SJ2 522 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 CCDC103Q8IW40 242 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 ZSCAN18Q8TBC5 510 aaPredicted RBP12.34□□□□□ -0.43
PTPN1-201ENST00000371621 ACSF2Q96CM8 615 aaPredicted RBP12.34□□□□□ -0.43
PTPN1-201ENST00000371621 PURBQ96QR8 312 aaKnown RBP12.34□□□□□ -0.43
PTPN1-201ENST00000371621 KCNK16Q96T55 309 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 AGPAT1Q99943 283 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 UPF3AQ9H1J1 476 aaKnown RBP12.34□□□□□ -0.43
PTPN1-201ENST00000371621 SAR1AQ9NR31 198 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 DKK3Q9UBP4 350 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 PEX2P28328 305 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 SSTR1P30872 391 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 TMEM63BQ5T3F8 832 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 DHDDSQ86SQ9 333 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 EYA3Q99504 573 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 TMEM117Q9H0C3 514 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 PLGRKTQ9HBL7 147 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 TAS2R1Q9NYW7 299 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 CCDC130P13994 396 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 CASP4P49662 377 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 MXI1P50539 228 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 SLC5A3P53794 718 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 AQP4P55087 323 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 FOXD4Q12950 439 aaPredicted RBP12.34□□□□□ -0.43
PTPN1-201ENST00000371621 NR1D2Q14995 579 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 LLGL2Q6P1M3 1020 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 RAPH1Q70E73 1250 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 CYFIP1Q7L576 1253 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 PTAR1Q7Z6K3 402 aaPredicted RBP12.34□□□□□ -0.43
PTPN1-201ENST00000371621 PALB2Q86YC2 1186 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 RFX6Q8HWS3 928 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 CALML6Q8TD86 181 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 DACT3Q96B18 629 aaPredicted RBP12.34□□□□□ -0.43
PTPN1-201ENST00000371621 ARHGEF26Q96DR7 871 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 ZSWIM1Q9BR11 485 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 ATAD3AQ9NVI7 634 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 TAGLN3Q9UI15 199 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 TTLL3Q9Y4R7 772 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 MYOCOSA0A1B0GUC4 107 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 H0YGN5 161 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 CSPG5O95196 566 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 TMEM253P0C7T8 217 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 POLR2MP0CAP2 368 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 MAGP20916 626 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 SERPINB5P36952 375 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 KLHL38Q2WGJ6 581 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 ZNF662Q6ZS27 426 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 IFNEQ86WN2 208 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 IFNLR1Q8IU57 520 aaPredicted RBP12.34□□□□□ -0.43
PTPN1-201ENST00000371621 ULK2Q8IYT8 1036 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 SIX6OS1Q8N1H7 587 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 SLC44A5Q8NCS7 719 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 BEGAINQ9BUH8 593 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 DHX36Q9H2U1 1008 aaKnown RBP12.34□□□□□ -0.43
PTPN1-201ENST00000371621 PRDM16Q9HAZ2 1276 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 PCDHA6Q9UN73 950 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 SOX13Q9UN79 622 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 PCDHA8Q9Y5H6 950 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 NFS1Q9Y697 457 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 V9GYQ6 96 aa12.34□□□□□ -0.43
PTPN1-201ENST00000371621 TLR2O60603 784 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 PON1P27169 355 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 ARPP19P56211 112 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 UBXN2AP68543 259 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 FOXO4P98177 505 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 LDLRAP1Q5SW96 308 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 MROH9Q5TGP6 573 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 DARS2Q6PI48 645 aaKnown RBP12.33□□□□□ -0.44
PTPN1-201ENST00000371621 PRELID2Q8N945 189 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 ZBTB38Q8NAP3 1195 aaPredicted RBP12.33□□□□□ -0.44
PTPN1-201ENST00000371621 ALG3Q92685 438 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 NMUR2Q9GZQ4 415 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 CHST7Q9NS84 486 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 EXOC7Q9UPT5 735 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 PHF24Q9UPV7 400 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 GPC6Q9Y625 555 aaPredicted RBP12.33□□□□□ -0.44
PTPN1-201ENST00000371621 A0A1W2PPM1 405 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 UQCRBP14927 111 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 ETFBP38117 255 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 YARSP54577 528 aaKnown RBP12.33□□□□□ -0.44
PTPN1-201ENST00000371621 PDK1Q15118 436 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 LRRC8EQ6NSJ5 796 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 RINLQ6ZS11 566 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 DENND5BQ6ZUT9 1274 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 NDUFAF2Q8N183 169 aa12.33□□□□□ -0.44
PTPN1-201ENST00000371621 LZTS2Q9BRK4 669 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms