RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 SMNDC1O75940 238 aaKnown RBP eCLIP13.27□□□□□ -0.29
GPC4-201ENST00000370828 OCM2P0CE71 109 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 OCMP0CE72 109 aaPredicted RBP13.27□□□□□ -0.29
GPC4-201ENST00000370828 RFX5P48382 616 aaPredicted RBP13.27□□□□□ -0.29
GPC4-201ENST00000370828 PRELPP51888 382 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 ERFEQ4G0M1 354 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 WDR59Q6PJI9 974 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 CCDC103Q8IW40 242 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 OSBPL7Q9BZF2 842 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 GALNT8Q9NY28 637 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 SNX13Q9Y5W8 968 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 OVOS2A0A0G2JMS6 1433 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 AP3B1O00203 1094 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 SRGAP2CP0DJJ0 459 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 NTRK3Q16288 839 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 KCNV1Q6PIU1 500 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 CNDP1Q96KN2 507 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 SYBUQ9NX95 663 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 V9GYQ6 96 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 AGPSO00116 658 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 TNFRSF8P28908 595 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 CENPCQ03188 943 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 CENPPQ6IPU0 288 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 GCNAQ96QF7 691 aa13.27□□□□□ -0.29
GPC4-201ENST00000370828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.26□□□□□ -0.29
GPC4-201ENST00000370828 SPDYE16A6NNV3 312 aaPredicted RBP13.26□□□□□ -0.29
GPC4-201ENST00000370828 SERPINB5P36952 375 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 RGS2P41220 211 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 NUP107P57740 925 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 TBCCQ15814 346 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 SPDYE2Q495Y8 402 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 TCHHL1Q5QJ38 904 aaPredicted RBP13.26□□□□□ -0.29
GPC4-201ENST00000370828 B3GNT6Q6ZMB0 384 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 CDC26Q8NHZ8 85 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 ACSF2Q96CM8 615 aaPredicted RBP13.26□□□□□ -0.29
GPC4-201ENST00000370828 IL1RL2Q9HB29 575 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 ATXN2Q99700 1313 aaKnown RBP13.26□□□□□ -0.29
GPC4-201ENST00000370828 EME2A4GXA9 379 aaPredicted RBP13.26□□□□□ -0.29
GPC4-201ENST00000370828 A8MXQ7 604 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 FOXN3O00409 490 aaPredicted RBP13.26□□□□□ -0.29
GPC4-201ENST00000370828 IL6STP40189 918 aaPredicted RBP13.26□□□□□ -0.29
GPC4-201ENST00000370828 MTFR1Q15390 333 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 TTC39BQ5VTQ0 682 aaPredicted RBP13.26□□□□□ -0.29
GPC4-201ENST00000370828 LRRC8BQ6P9F7 803 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 KRT27Q7Z3Y8 459 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 SKA2Q8WVK7 121 aaPredicted RBP13.26□□□□□ -0.29
GPC4-201ENST00000370828 PYDC1Q8WXC3 89 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 DUSP9Q99956 384 aaKnown RBP13.26□□□□□ -0.29
GPC4-201ENST00000370828 SH2D3AQ9BRG2 576 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 REXO2Q9Y3B8 237 aaKnown RBP13.26□□□□□ -0.29
GPC4-201ENST00000370828 SESN1Q9Y6P5 492 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 TMEM2Q9UHN6 1383 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 FLT1P17948 1338 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 C1orf232A0A0U1RR37 186 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 LRRC10BA6NIK2 292 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 NFIBO00712 420 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 EARS2Q5JPH6 523 aaKnown RBP13.26□□□□□ -0.29
GPC4-201ENST00000370828 GATAD2AQ86YP4 633 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 CLVS1Q8IUQ0 354 aaPredicted RBP13.26□□□□□ -0.29
GPC4-201ENST00000370828 DEFB107AQ8IZN7 70 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 POU5F2Q8N7G0 328 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 BFARQ9NZS9 450 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 SUGT1Q9Y2Z0 365 aa13.26□□□□□ -0.29
GPC4-201ENST00000370828 RNF225M0QZC1 329 aaPredicted RBP13.25□□□□□ -0.29
GPC4-201ENST00000370828 ACTR2P61160 394 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 ACAP1Q15027 740 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 C2CD6Q53TS8 623 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 ELMSAN1Q6PJG2 1045 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 MARK2Q7KZI7 788 aaKnown RBP13.25□□□□□ -0.29
GPC4-201ENST00000370828 ZNF554Q86TJ5 538 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 DDIASQ8IXT1 998 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 CKAP2Q8WWK9 683 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 GCOM2Q9BZD3 368 aaPredicted RBP13.25□□□□□ -0.29
GPC4-201ENST00000370828 LMTK3Q96Q04 1460 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 TCP10L2B9ZVM9 353 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 EYA4O95677 639 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 C4orf50Q6ZRC1 276 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 THNSL1Q8IYQ7 743 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 MAGEC3Q8TD91 643 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 CCNL1Q9UK58 526 aaPredicted RBP13.25□□□□□ -0.29
GPC4-201ENST00000370828 GRID1Q9ULK0 1009 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 ERBB3P21860 1342 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 ANGPT2O15123 496 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 SLC26A4O43511 780 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 ATP9BO43861 1147 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 EIF2AK2P19525 551 aaKnown RBP13.25□□□□□ -0.29
GPC4-201ENST00000370828 S100A5P33763 92 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 GSCP56915 257 aaPredicted RBP13.25□□□□□ -0.29
GPC4-201ENST00000370828 UBE3AQ05086 875 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 BLMHQ13867 455 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 MIS18BP1Q6P0N0 1132 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 TRIM72Q6ZMU5 477 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 ADGRF4Q8IZF3 695 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 C1orf131Q8NDD1 294 aaKnown RBP13.25□□□□□ -0.29
GPC4-201ENST00000370828 STKLD1Q8NE28 680 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 PAFAH2Q99487 392 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 NRBP2Q9NSY0 501 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 DAPK2Q9UIK4 370 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 TMCO1Q9UM00 188 aa13.25□□□□□ -0.29
GPC4-201ENST00000370828 COMMD3-BMI1R4GMX3 469 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms