RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 P3H1Q32P28 736 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 CEP128Q6ZU80 1094 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 CFAP36Q96G28 342 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 CALR3Q96L12 384 aaKnown RBP7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 CDT1Q9H211 546 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 DHX33Q9H6R0 707 aaKnown RBP7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 GPATCH2LQ9NWQ4 482 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 LRFN2Q9ULH4 789 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 SLX4Q8IY92 1834 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 ZC3H11AO75152 810 aaKnown RBP eCLIP7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 MOCS2O96007 188 aaPredicted RBP7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 PHBP35232 272 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 GNL1P36915 607 aaPredicted RBP7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 COILP38432 576 aaPredicted RBP7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 IRX4P78413 519 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 PTPN11Q06124 597 aaPredicted RBP7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 PDIA2Q13087 525 aaKnown RBP7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 LONRF1Q17RB8 773 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 GOLGA7BQ2TAP0 167 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 KIAA1841Q6NSI8 718 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 ARHGEF18Q6ZSZ5 1173 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 ZNF677Q86XU0 584 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 CRYGNQ8WXF5 182 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 ISCUQ9H1K1 167 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 VTA1Q9NP79 307 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 DMAC2Q9NW81 257 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 ARHGAP28Q9P2N2 729 aa7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 PRG3Q9Y2Y8 225 aaPredicted RBP7.52□□□□□ -1.21
TGFBR3-202ENST00000370399 C17orf102A2RUQ5 167 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 F8VP50 259 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 RGS20O76081 388 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 RBP3P10745 1247 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 ACAT1P24752 427 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 RGS2P41220 211 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 CPT1AP50416 773 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 MNAT1P51948 309 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 NDST1P52848 882 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 EIF3EP60228 445 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 TFDP2Q14188 446 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 DCAF6Q58WW2 860 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 GKAP1Q5VSY0 366 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 CENPUQ71F23 418 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 CACNA2D3Q8IZS8 1091 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 ALG3Q92685 438 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 ACO2Q99798 780 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 NMRK2Q9NPI5 230 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 A0A0B4J269 797 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 HMGB1P1B2RPK0 211 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 YBX3P16989 372 aaKnown RBP eCLIP7.51□□□□□ -1.218e-7■■■□□ 15.9
TGFBR3-202ENST00000370399 CA4P22748 312 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 PSMC4P43686 418 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 RPL7AP62424 266 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 MXRA7P84157 204 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 BYSLQ13895 437 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 VSIG1Q86XK7 387 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 ACTRT1Q8TDG2 376 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 ZNF560Q96MR9 790 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 SMYD3Q9H7B4 428 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 MRPL42Q9Y6G3 142 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 TNRC6CQ9HCJ0 1690 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 COL22A1Q8NFW1 1626 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 C10orf71Q711Q0 1435 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 A0A0A6YYK5 440 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 A0A0G2JLL6 359 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 A6NNZ2 444 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 ARF4P18085 180 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 HSD17B3P37058 310 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 PIGHQ14442 188 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 ZRSR2Q15696 482 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 TUBB8Q3ZCM7 444 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 FAXCQ5TGI0 409 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 PRRT2Q7Z6L0 340 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 SPATA18Q8TC71 538 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 SNF8Q96H20 258 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 TNIP3Q96KP6 325 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 ATP6V1G3Q96LB4 118 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 C10orf88Q9H8K7 445 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 SIX2Q9NPC8 291 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 SAE1Q9UBE0 346 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 RAB21Q9UL25 225 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 FNDC3AQ9Y2H6 1198 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 MAFBQ9Y5Q3 323 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 MYO9BQ13459 2157 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 RASA4BC9J798 803 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 RASA4O43374 803 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 UPP2O95045 317 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 RARAP10276 462 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 MSH2P43246 934 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 ITGA8P53708 1063 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 SARNPP82979 210 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 CCDC14Q49A88 953 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 TMEM63BQ5T3F8 832 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 FOXR2Q6PJQ5 311 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 FAM47EQ6ZV65 393 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 CCDC110Q8TBZ0 833 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 PLEKHO2Q8TD55 490 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 RNF139Q8WU17 664 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 ARHGEF2Q92974 986 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 TMEM176AQ96HP8 235 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms