RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 DDHD2O94830 711 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 MYCLP12524 364 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-204ENST00000369530 AXLP30530 894 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 MPP3Q13368 585 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 COLGALT1Q8NBJ5 622 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 NOA1Q8NC60 698 aaKnown RBP7.35□□□□□ -1.23
CSDE1-204ENST00000369530 STAMQ92783 540 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 TMEM175Q9BSA9 504 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 TRIM4Q9C037 500 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 NKX2-4Q9H2Z4 354 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 HAUS2Q9NVX0 235 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 PLXNA2O75051 1894 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 LAMA5O15230 3695 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 DOCK4Q8N1I0 1966 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 CKAP5Q14008 2032 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 POLR2DO15514 142 aaKnown RBP7.34□□□□□ -1.23
CSDE1-204ENST00000369530 RAB30Q15771 203 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 DUSP6Q16828 381 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 PAPD7Q5XG87 772 aaKnown RBP7.34□□□□□ -1.23
CSDE1-204ENST00000369530 CCDC155Q8N6L0 562 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 SMRP1Q8NCR6 262 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 NELL1Q92832 810 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 TIFAQ96CG3 184 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 MKNK1Q9BUB5 465 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 HERC2P3Q9BVR0 1158 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 OLFML3Q9NRN5 406 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 KCNH3Q9ULD8 1083 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 ZNF318Q5VUA4 2279 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 OR52Z1P0C646 297 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 WDR44Q5JSH3 913 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 IER5Q5VY09 327 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 CMASQ8NFW8 434 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-204ENST00000369530 UIMC1Q96RL1 719 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 PLIN2Q99541 437 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 ACO2Q99798 780 aaKnown RBP7.34□□□□□ -1.23
CSDE1-204ENST00000369530 C17orf80Q9BSJ5 609 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 YIPF3Q9GZM5 350 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 KCTD10Q9H3F6 313 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 STK24Q9Y6E0 443 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 SCN8AQ9UQD0 1980 aa7.34□□□□□ -1.23
CSDE1-204ENST00000369530 PP2D1A8MPX8 630 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 M0QZQ0 153 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 TPD52L2O43399 206 aaKnown RBP7.34□□□□□ -1.24
CSDE1-204ENST00000369530 SERPINC1P01008 464 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 LRPAP1P30533 357 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 CD52P31358 61 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 NAMPTP43490 491 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 EPHA5P54756 1037 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 CDC42EP1Q00587 391 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 PLA2G4FQ68DD2 849 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 CCDC121Q6ZUS5 278 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 ADGRD2Q7Z7M1 963 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 KIRREL3Q8IZU9 778 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 MMGT1Q8N4V1 131 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 C3orf58Q8NDZ4 430 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 CYFIP2Q96F07 1278 aa7.34□□□□□ -1.24
CSDE1-204ENST00000369530 ZMAT2Q96NC0 199 aaKnown RBP7.34□□□□□ -1.24
CSDE1-204ENST00000369530 NAPGQ99747 312 aaPredicted RBP7.34□□□□□ -1.24
CSDE1-204ENST00000369530 BUB1BO60566 1050 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 STAU1O95793 577 aaKnown RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 TDGF1P13385 188 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 BMPR1AP36894 532 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 MDH1P40925 334 aaKnown RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 CLCN4P51793 760 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 CCL23P55773 120 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 SH3BGRP55822 239 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 PTGDRQ13258 359 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 PNOCQ13519 176 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 EMC2Q15006 297 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 IFI16Q16666 785 aaKnown RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 SPRED3Q2MJR0 410 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 EMBQ6PCB8 327 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 SLC24A5Q71RS6 500 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 FAM114A1Q8IWE2 563 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 C7orf31Q8N865 590 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 ZBTB8BQ8NAP8 495 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 ATXN2LQ8WWM7 1075 aaKnown RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 FAM192AQ9GZU8 254 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 QPCTLQ9NXS2 382 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.33□□□□□ -1.247e-7■□□□□ 9.9
CSDE1-204ENST00000369530 MAPK8IP1Q9UQF2 711 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 TBC1D30Q9Y2I9 924 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 TMED5Q9Y3A6 229 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 TRIOBPQ9H2D6 2365 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 CEP192Q8TEP8 1941 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 CA3P07451 260 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 GSTA2P09210 222 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 ZNF18P17022 549 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 FGFR3P22607 806 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 GATMP50440 423 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 MYO1EQ12965 1108 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 DPCR1Q3MIW9 517 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 OR52E8Q6IFG1 317 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 IQCKQ8N0W5 287 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 TEKT4Q8WW24 435 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 MAIP1Q8WWC4 291 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 CORO1BQ9BR76 489 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 EIF2AQ9BY44 585 aaKnown RBP7.33□□□□□ -1.24
CSDE1-204ENST00000369530 ANKRD36A6QL64 1941 aa7.33□□□□□ -1.24
CSDE1-204ENST00000369530 DPPA5A6NC42 116 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms