RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 CDH19Q9H159 772 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 POLR1BQ9H9Y6 1135 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 PYCARDQ9ULZ3 195 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 NPATQ14207 1427 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 EFCAB10A6NFE3 127 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 TRIM64A6NGJ6 449 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 TRPC5OSA6NMA1 111 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 TDGQ13569 410 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 ERMARDQ5T6L9 678 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 PGBD2Q6P3X8 592 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 C3orf20Q8ND61 904 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 GPT2Q8TD30 523 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 PLEKHA4Q9H4M7 779 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 NRBP2Q9NSY0 501 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 BTG4Q9NY30 223 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 STARD13Q9Y3M8 1113 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 SSH2Q76I76 1423 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 UBA6A0AVT1 1052 aaPredicted RBP9.04□□□□□ -0.96
VANGL1-204ENST00000369510 GDF11O95390 407 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 BEND5Q7L4P6 421 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 C10orf53Q8N6V4 93 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 CCDC126Q96EE4 140 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 GIMAP5Q96F15 307 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 ASIC4Q96FT7 647 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 SYT4Q9H2B2 425 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 CXorf56Q9H5V9 222 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 SAE1Q9UBE0 346 aaPredicted RBP9.04□□□□□ -0.96
VANGL1-204ENST00000369510 LRWD1Q9UFC0 647 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 DBR1Q9UK59 544 aaKnown RBP9.04□□□□□ -0.96
VANGL1-204ENST00000369510 TPRKBQ9Y3C4 175 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 RGSL1A5PLK6 1076 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 GMNCA6NCL1 334 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 AXLP30530 894 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 ACADSBP45954 432 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 RPS7P62081 194 aaKnown RBP9.04□□□□□ -0.96
VANGL1-204ENST00000369510 ALKBH5Q6P6C2 394 aaKnown RBP9.04□□□□□ -0.96
VANGL1-204ENST00000369510 NET1Q7Z628 596 aaPredicted RBP9.04□□□□□ -0.96
VANGL1-204ENST00000369510 THEM5Q8N1Q8 247 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 HDDC3Q8N4P3 179 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 MSL3Q8N5Y2 521 aaKnown RBP9.04□□□□□ -0.96
VANGL1-204ENST00000369510 CDHR1Q96JP9 859 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 SLF1Q9BQI6 1058 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 CCSER2Q9H7U1 834 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 PNO1Q9NRX1 252 aaKnown RBP9.04□□□□□ -0.96
VANGL1-204ENST00000369510 GTF2A1LQ9UNN4 478 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 ARHGEF10O15013 1369 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 NUAK1O60285 661 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 PSIP1O75475 530 aaKnown RBP9.04□□□□□ -0.96
VANGL1-204ENST00000369510 MAGEA4P43358 317 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 TNFAIP1Q13829 316 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 E2F4Q16254 413 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 CACHD1Q5VU97 1274 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 AADACL4Q5VUY2 407 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 LHFPL3Q86UP9 236 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 EPHX4Q8IUS5 362 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 AADATQ8N5Z0 425 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 UBASH3BQ8TF42 649 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 SKA1Q96BD8 255 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 BHMT2Q9H2M3 363 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 ETNK1Q9HBU6 452 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 TIMMDC1Q9NPL8 285 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 PTPN22Q9Y2R2 807 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 TRIM43BA6NCK2 446 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 ABCB4P21439 1286 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 VHLP40337 213 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 PRIM2P49643 509 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 KNOP1Q1ED39 458 aaKnown RBP9.04□□□□□ -0.96
VANGL1-204ENST00000369510 TOGARAM2Q6ZUX3 1019 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 IFNEQ86WN2 208 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 REXO1Q8N1G1 1221 aaKnown RBP9.04□□□□□ -0.96
VANGL1-204ENST00000369510 DPH5Q9H2P9 285 aa9.04□□□□□ -0.96
VANGL1-204ENST00000369510 LOC110117498-PIK3R3F6TDL0 507 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 CHRNA5P30532 468 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 PEX5P50542 639 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 CDH11P55287 796 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 AKIRIN2Q53H80 203 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 PIK3R3Q92569 461 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 TSPAN18Q96SJ8 248 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 DNAJC11Q9NVH1 559 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 CDYLQ9Y232 598 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 MTHFD1P11586 935 aaKnown RBP9.03□□□□□ -0.96
VANGL1-204ENST00000369510 PTPN20Q4JDL3 420 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 ZCWPW2Q504Y3 356 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 CYP4F22Q6NT55 531 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 TMEM206Q9H813 350 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 COPRSQ9NQ92 184 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 CMTM6Q9NX76 183 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 ADGRA2Q96PE1 1338 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 MAFKO60675 156 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 ALDH1B1P30837 517 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 EIF3EP60228 445 aaKnown RBP9.03□□□□□ -0.96
VANGL1-204ENST00000369510 SRFBP1Q8NEF9 429 aaKnown RBP9.03□□□□□ -0.96
VANGL1-204ENST00000369510 STARD8Q92502 1023 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 THRSPQ92748 146 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 TMEM138Q9NPI0 162 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 CD3EAPO15446 510 aaKnown RBP9.03□□□□□ -0.96
VANGL1-204ENST00000369510 ZNF23P17027 643 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 PTGS2P35354 604 aa9.03□□□□□ -0.96
VANGL1-204ENST00000369510 MLLT6P55198 1093 aaPredicted RBP9.03□□□□□ -0.96
VANGL1-204ENST00000369510 KCNK10P57789 538 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms