RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 EFNA5P52803 228 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 STKLD1Q8NE28 680 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 ZC3H15Q8WU90 426 aaKnown RBP18.96■□□□□ 0.63
SNX27-202ENST00000368841 ANKRD49Q8WVL7 239 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 NSUN4Q96CB9 384 aaKnown RBP18.96■□□□□ 0.63
SNX27-202ENST00000368841 SMARCAD1Q9H4L7 1026 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 RBM12Q9NTZ6 932 aaKnown RBP18.96■□□□□ 0.63
SNX27-202ENST00000368841 HPCAP84074 193 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 TRIM62Q9BVG3 475 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 KLC4Q9NSK0 619 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 PGK2P07205 417 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 HARS2P49590 506 aaKnown RBP18.96■□□□□ 0.63
SNX27-202ENST00000368841 OVGP1Q12889 678 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 SDE2Q6IQ49 451 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 OTOAQ7RTW8 1153 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 SKAP2O75563 359 aaPredicted RBP18.96■□□□□ 0.63
SNX27-202ENST00000368841 ITGA8P53708 1063 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 IER5Q5VY09 327 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 SP8Q8IXZ3 490 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 ZKSCAN4Q969J2 545 aaPredicted RBP18.96■□□□□ 0.63
SNX27-202ENST00000368841 VTNP04004 478 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 SNAPC2Q13487 334 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 ENOSF1Q7L5Y1 443 aa18.96■□□□□ 0.63
SNX27-202ENST00000368841 CAB39Q9Y376 341 aaPredicted RBP18.96■□□□□ 0.63
SNX27-202ENST00000368841 LRG1P02750 347 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 MLNP12872 115 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 COMTP21964 271 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 SERPINB5P36952 375 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 C12orf60Q5U649 245 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 DIS3LQ8TF46 1054 aaKnown RBP18.95■□□□□ 0.62
SNX27-202ENST00000368841 TCF3P15923 654 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.95■□□□□ 0.62
SNX27-202ENST00000368841 HACL1Q9UJ83 578 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 RAD51CO43502 376 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 MED21Q13503 144 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 TCEA2Q15560 299 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 PAWRQ96IZ0 340 aaKnown RBP18.95■□□□□ 0.62
SNX27-202ENST00000368841 ZFYVE28Q9HCC9 887 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 ANO9A1A5B4 782 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 TPST1O60507 370 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 TTC39BQ5VTQ0 682 aaPredicted RBP18.95■□□□□ 0.62
SNX27-202ENST00000368841 GUF1Q8N442 669 aaKnown RBP18.95■□□□□ 0.62
SNX27-202ENST00000368841 CCL15-CCL14A0A0B4J2E2 113 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 PCNAP12004 261 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 GPD1P21695 349 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 DNAJB2P25686 324 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 CHI3L1P36222 383 aaPredicted RBP18.95■□□□□ 0.62
SNX27-202ENST00000368841 CDH18Q13634 790 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 CCL15Q16663 113 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 ERAP2Q6P179 960 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 MDM1Q8TC05 714 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 H0YC42 278 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 ATN1P54259 1190 aaPredicted RBP18.95■□□□□ 0.62
SNX27-202ENST00000368841 MTHFD1LQ6UB35 978 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 MTMR4Q9NYA4 1195 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 PRR12Q9ULL5 1215 aa18.95■□□□□ 0.62
SNX27-202ENST00000368841 CDK12Q9NYV4 1490 aaPredicted RBP18.95■□□□□ 0.62
SNX27-202ENST00000368841 TTLL13PA6NNM8 815 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 TRIM16O95361 564 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 GLRBP48167 497 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 SV2CQ496J9 727 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 UBXN8O00124 270 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 SIX5Q8N196 739 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.94■□□□□ 0.62
SNX27-202ENST00000368841 NRKQ7Z2Y5 1582 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 CYP2C9P11712 490 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 MAPK9P45984 424 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 BYSLQ13895 437 aaKnown RBP18.94■□□□□ 0.62
SNX27-202ENST00000368841 SNX17Q15036 470 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 GPATCH2LQ9NWQ4 482 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.94■□□□□ 0.62
SNX27-202ENST00000368841 CRLS1Q9UJA2 301 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 TCF7P36402 384 aaPredicted RBP18.94■□□□□ 0.62
SNX27-202ENST00000368841 SGSM1Q2NKQ1 1148 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 CEP78Q5JTW2 689 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 CACUL1Q86Y37 369 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 CYP4F12Q9HCS2 524 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 WWOXQ9NZC7 414 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 PSMC3IPQ9P2W1 217 aaPredicted RBP18.94■□□□□ 0.62
SNX27-202ENST00000368841 SHROOM2Q13796 1616 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 KRT8P05787 483 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 SLC1A1P43005 524 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 CASP4P49662 377 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 TAAR1Q96RJ0 339 aa18.94■□□□□ 0.62
SNX27-202ENST00000368841 UCHL3P15374 230 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 STAT4Q14765 748 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 TMEM154Q6P9G4 183 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 ARMC2Q8NEN0 867 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 KATNAL1Q9BW62 490 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 STK33Q9BYT3 514 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 SPATA31A3Q5VYP0 1347 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 THAP11Q96EK4 314 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 PITPNM2Q9BZ72 1349 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 NPEPPSP55786 919 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 LINC00116Q8NCU8 138 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 HPDLQ96IR7 371 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 NT5C1AQ9BXI3 368 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 KCNT1Q5JUK3 1230 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 TTC37Q6PGP7 1564 aa18.93■□□□□ 0.62
SNX27-202ENST00000368841 GNASQ5JWF2 1037 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms