RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ZNF148Q9UQR1 794 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 PHIPQ8WWQ0 1821 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 RASA4BC9J798 803 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 MAGEB2O15479 319 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 RASA4O43374 803 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 UBOX5O94941 541 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 EGFRP00533 1210 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 ITGAVP06756 1048 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 CETPP11597 493 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 EZRP15311 586 aaKnown RBP15.1■□□□□ 0.01
CD48-201ENST00000368045 GJC1P36383 396 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 SKIV2L2P42285 1042 aaKnown RBP15.1■□□□□ 0.01
CD48-201ENST00000368045 NCALDP61601 193 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 MTFR1Q15390 333 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 FAM133BQ5BKY9 247 aaKnown RBP15.1■□□□□ 0.01
CD48-201ENST00000368045 ZBTB41Q5SVQ8 909 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 PPP1R15BQ5SWA1 713 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 DAB2IPQ5VWQ8 1189 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 MFSD7Q6UXD7 560 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 POLNQ7Z5Q5 900 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 PWWP2AQ96N64 755 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 WRNIP1Q96S55 665 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 PCDH9Q9HC56 1237 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 SAYSD1Q9NPB0 183 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 PIM2Q9P1W9 311 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 DNPEPQ9ULA0 475 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 PCDHGC3Q9UN70 934 aa15.1■□□□□ 0.01
CD48-201ENST00000368045 hCG_1818297A0A087WSY0 165 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 EXOC1LA0A1B0GW35 172 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 NQO1P15559 274 aaKnown RBP15.09■□□□□ 0.01
CD48-201ENST00000368045 EIF4BP23588 611 aaKnown RBP15.09■□□□□ 0.01
CD48-201ENST00000368045 RXRBP28702 533 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 ARSEP51690 589 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 YWHAEP62258 255 aaKnown RBP15.09■□□□□ 0.01
CD48-201ENST00000368045 SP2Q02086 613 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 CAPSQ13938 189 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 ZNF268Q14587 947 aaPredicted RBP15.09■□□□□ 0.01
CD48-201ENST00000368045 OASLQ15646 514 aaKnown RBP15.09■□□□□ 0.01
CD48-201ENST00000368045 SGSM1Q2NKQ1 1148 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 TFDP3Q5H9I0 405 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 FAM160B1Q5W0V3 765 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 RGS9BPQ6ZS82 235 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 PCGF5Q86SE9 256 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 TRABD2AQ86V40 505 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 FAM228AQ86W67 206 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 MRPL4Q9BYD3 311 aaKnown RBP15.09■□□□□ 0.01
CD48-201ENST00000368045 ECT2Q9H8V3 914 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 KLHL14Q9P2G3 628 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 FETUBQ9UGM5 382 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 SLC24A2Q9UI40 661 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 STRIP2Q9ULQ0 834 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 CEP83Q9Y592 693 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 IVNS1ABPQ9Y6Y0 642 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 RLFQ13129 1914 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 WDR81Q562E7 1941 aa15.09■□□□□ 0.01
CD48-201ENST00000368045 PI4K2BG5E9Z4 385 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 ALOX15BO15296 676 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 GAS2O43903 313 aaKnown RBP15.08■□□□□ 0.01
CD48-201ENST00000368045 TOM1L1O75674 476 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 TAC1P20366 129 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 RPL7AP62424 266 aaKnown RBP15.08■□□□□ 0.01
CD48-201ENST00000368045 ZNF252P-AS1Q0IIN9 211 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 NEDD9Q14511 834 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 TMED2Q15363 201 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 TMEM63BQ5T3F8 832 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 RNASEH2BQ5TBB1 312 aaKnown RBP15.08■□□□□ 0.01
CD48-201ENST00000368045 CYP4F22Q6NT55 531 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 DCUN1D2Q6PH85 259 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 MICALL2Q8IY33 904 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 GDAP1Q8TB36 358 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 SLC16A10Q8TF71 515 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 FAM167AQ96KS9 214 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 FAM118BQ9BPY3 351 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 TBK1Q9UHD2 729 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 STARD13Q9Y3M8 1113 aa15.08■□□□□ 0.01
CD48-201ENST00000368045 OGTO15294 1046 aa15.08■□□□□ 0
CD48-201ENST00000368045 FAM189A1O60320 539 aa15.08■□□□□ 0
CD48-201ENST00000368045 GH1P01241 217 aa15.08■□□□□ 0
CD48-201ENST00000368045 KRT10P13645 584 aa15.08■□□□□ 0
CD48-201ENST00000368045 ATF7P17544 494 aaPredicted RBP15.08■□□□□ 0
CD48-201ENST00000368045 MAP2K2P36507 400 aa15.08■□□□□ 0
CD48-201ENST00000368045 CDKN2BP42772 138 aa15.08■□□□□ 0
CD48-201ENST00000368045 GPS1Q13098 491 aa15.08■□□□□ 0
CD48-201ENST00000368045 DUOXA2Q1HG44 320 aa15.08■□□□□ 0
CD48-201ENST00000368045 ZFYVE27Q5T4F4 411 aa15.08■□□□□ 0
CD48-201ENST00000368045 KAZNQ674X7 775 aa15.08■□□□□ 0
CD48-201ENST00000368045 CENPUQ71F23 418 aa15.08■□□□□ 0
CD48-201ENST00000368045 EXOC8Q8IYI6 725 aa15.08■□□□□ 0
CD48-201ENST00000368045 TTC13Q8NBP0 860 aa15.08■□□□□ 0
CD48-201ENST00000368045 DENND1AQ8TEH3 1009 aa15.08■□□□□ 0
CD48-201ENST00000368045 ZNF526Q8TF50 670 aaPredicted RBP15.08■□□□□ 0
CD48-201ENST00000368045 MCEEQ96PE7 176 aa15.08■□□□□ 0
CD48-201ENST00000368045 FHDC1Q9C0D6 1143 aaPredicted RBP15.08■□□□□ 0
CD48-201ENST00000368045 NOD2Q9HC29 1040 aa15.08■□□□□ 0
CD48-201ENST00000368045 SSU72Q9NP77 194 aaKnown RBP15.08■□□□□ 0
CD48-201ENST00000368045 CISHQ9NSE2 258 aa15.08■□□□□ 0
CD48-201ENST00000368045 AGAP1Q9UPQ3 857 aa15.08■□□□□ 0
CD48-201ENST00000368045 SSC5DA1L4H1 1573 aa15.07■□□□□ 0
CD48-201ENST00000368045 SPDYE16A6NNV3 312 aaPredicted RBP15.07■□□□□ 0
CD48-201ENST00000368045 SMAPO00193 183 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms