RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 FGGP02679 453 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 MMP3P08254 477 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 UNGP13051 313 aaPredicted RBP11.59□□□□□ -0.55
H3F3A-202ENST00000366814 ACO1P21399 889 aaKnown RBP11.59□□□□□ -0.55
H3F3A-202ENST00000366814 ITGB8P26012 769 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 GUCY2DQ02846 1103 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 CENPCQ03188 943 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 NNTQ13423 1086 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 GRIK4Q16099 956 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 ZNF699Q32M78 642 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 MTHFD1LQ6UB35 978 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 ZNF410Q86VK4 478 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 FAM126BQ8IXS8 530 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 MCOLN2Q8IZK6 566 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 SLC43A3Q8NBI5 491 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 HDAC7Q8WUI4 952 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 NLRP7Q8WX94 980 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 ELMO3Q96BJ8 720 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 ZSWIM1Q9BR11 485 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 ADPGKQ9BRR6 497 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 C16orf70Q9BSU1 422 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 CDT1Q9H211 546 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 APOBEC3GQ9HC16 384 aaKnown RBP11.59□□□□□ -0.55
H3F3A-202ENST00000366814 EPB41L5Q9HCM4 733 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 MRPL47Q9HD33 250 aaKnown RBP11.59□□□□□ -0.55
H3F3A-202ENST00000366814 GDF3Q9NR23 364 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 A0A087WZ62 844 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 SLC34A2O95436 690 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 TIMP1P01033 207 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 CYP1A1P04798 512 aaPredicted RBP11.58□□□□□ -0.56
H3F3A-202ENST00000366814 HOXD8P13378 290 aaPredicted RBP11.58□□□□□ -0.56
H3F3A-202ENST00000366814 COMTP21964 271 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 CUL1Q13616 776 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 NBPF20Q3BBV1 942 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 FAM47CQ5HY64 1035 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 PLPP6Q8IY26 295 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 LINC01465Q8N7H1 131 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 GOLGA6L1Q8N7Z2 621 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 EIF1ADQ8N9N8 165 aaKnown RBP11.58□□□□□ -0.56
H3F3A-202ENST00000366814 FAXDC2Q96IV6 333 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 ZNF668Q96K58 619 aaPredicted RBP11.58□□□□□ -0.56
H3F3A-202ENST00000366814 FAM84AQ96KN4 292 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 FDXACB1Q9BRP7 624 aaPredicted RBP11.58□□□□□ -0.56
H3F3A-202ENST00000366814 PPP1R12CQ9BZL4 782 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 UBXN6Q9BZV1 441 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 IFT122Q9HBG6 1241 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 CEP83Q9Y592 693 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 SCINQ9Y6U3 715 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 KAT6AQ92794 2004 aa11.58□□□□□ -0.56
H3F3A-202ENST00000366814 FAM170AA1A519 330 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 B4GALT5O43286 388 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 SART1O43290 800 aaKnown RBP11.57□□□□□ -0.56
H3F3A-202ENST00000366814 RAD51CO43502 376 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 CD4P01730 458 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 CTNNA2P26232 953 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 SLC1A1P43005 524 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 MYL6P60660 151 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 OSTNP61366 133 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 FPGSQ05932 587 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 NAA35Q5VZE5 725 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 EEF1DP3Q658K8 133 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 SND1Q7KZF4 910 aaKnown RBP eCLIP11.57□□□□□ -0.563e-10■■■■□ 22.6
H3F3A-202ENST00000366814 GSPT2Q8IYD1 628 aaKnown RBP11.57□□□□□ -0.56
H3F3A-202ENST00000366814 FAM71BQ8TC56 605 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 WHAMMQ8TF30 809 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 CAVIN3Q969G5 261 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 RUFY1Q96T51 708 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 AP1M1Q9BXS5 423 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 TRPV6Q9H1D0 765 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 ASB7Q9H672 318 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 MINDY3Q9H8M7 445 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 LCMT1Q9UIC8 334 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 ANAPC7Q9UJX3 599 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 TBX21Q9UL17 535 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.57□□□□□ -0.56
H3F3A-202ENST00000366814 SCN10AQ9Y5Y9 1956 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 MYO1FO00160 1098 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 LSM8O95777 96 aaKnown RBP11.57□□□□□ -0.56
H3F3A-202ENST00000366814 VTNP04004 478 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 GLI1P08151 1106 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 STAG3L1P0CL83 205 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 MYBL2P10244 700 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 P4HA1P13674 534 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 CTNNA1P35221 906 aaKnown RBP11.57□□□□□ -0.56
H3F3A-202ENST00000366814 RWDD2BP57060 319 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 SHHQ15465 462 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 ZNF667Q5HYK9 610 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 PPP1R13LQ8WUF5 828 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 CPA5Q8WXQ8 436 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 IFT81Q8WYA0 676 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 RUNDC3BQ96NL0 473 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 DDX47Q9H0S4 455 aaKnown RBP11.57□□□□□ -0.56
H3F3A-202ENST00000366814 RAB17Q9H0T7 212 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 ADAM22Q9P0K1 906 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 RASAL2Q9UJF2 1139 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 MTUS1Q9ULD2 1270 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 HPCAL4Q9UM19 191 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 UTP11Q9Y3A2 253 aaKnown RBP11.57□□□□□ -0.56
H3F3A-202ENST00000366814 PCDHA3Q9Y5H8 950 aa11.57□□□□□ -0.56
H3F3A-202ENST00000366814 GOLGA6BA6NDN3 693 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms