RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 KIAA0319LQ8IZA0 1049 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 AMER2Q8N7J2 671 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 NEU4Q8WWR8 484 aaPredicted RBP3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 SNX19Q92543 992 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 CAVIN3Q969G5 261 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 COQ10AQ96MF6 247 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 NELL2Q99435 816 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 HEPHQ9BQS7 1158 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 LRFN3Q9BTN0 628 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 TLR10Q9BXR5 811 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 INTS13Q9NVM9 706 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 DKK2Q9UBU2 259 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 SLC45A2Q9UMX9 530 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 PCDHA6Q9UN73 950 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 L1RE1Q9UN81 338 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 MAP3K2Q9Y2U5 619 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 RAD54BQ9Y620 910 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 HS3ST4Q9Y661 456 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 SPATA31A3Q5VYP0 1347 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 CENPVL1A0A0U1RR11 272 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 UNC119BA6NIH7 251 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 FOXN3O00409 490 aaPredicted RBP3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 TPP1O14773 563 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 CAND2O75155 1236 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 SPDEFO95238 335 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 GRPP07492 148 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 ATXN1LP0C7T5 689 aaKnown RBP3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 SLC7A1P30825 629 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 KRTAP10-2P60368 255 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 EXOSC9Q06265 439 aaKnown RBP3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 TCF15Q12870 199 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 DYRK1AQ13627 763 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 POLD3Q15054 466 aaPredicted RBP3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 KIAA0753Q2KHM9 967 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 ERCC6LQ2NKX8 1250 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 RNF220Q5VTB9 566 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 FNDC7Q5VTL7 733 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 CCAR1Q8IX12 1150 aaKnown RBP3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 ULK2Q8IYT8 1036 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 PCSK9Q8NBP7 692 aaKnown RBP3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 FAM46DQ8NEK8 389 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 POC1BQ8TC44 478 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 LRTOMTQ8WZ04 291 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 FUBP1Q96AE4 644 aaKnown RBP3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 TMEM125Q96AQ2 219 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 PTCD3Q96EY7 689 aaKnown RBP3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 TEX101Q9BY14 249 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 WDR11Q9BZH6 1224 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 SERHL2Q9H4I8 314 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 CASS4Q9NQ75 786 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 CTTNBP2NLQ9P2B4 639 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 ANKFY1Q9P2R3 1169 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 HSFX1Q9UBD0 423 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 STAP2Q9UGK3 403 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 TMX2Q9Y320 296 aa3.33□□□□□ -1.88
RNU6-428P-201ENST00000362942 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 A0A0B4J269 797 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 E9PLN8 166 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 F5H697 171 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 LPXNO60711 386 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 RAMP2O60895 175 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 UNC5CO95185 931 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 KIF20AO95235 890 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 FSHBP01225 129 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 KITP10721 976 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 PIM1P11309 404 aaPredicted RBP3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 BRAFP15056 766 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 HDCP19113 662 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 EN2P19622 333 aaPredicted RBP3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 TGM1P22735 817 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 LRPAP1P30533 357 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 ACVRL1P37023 503 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 ZEB1P37275 1124 aaPredicted RBP3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 VIPR2P41587 438 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 NPTX2P47972 431 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 NDUFV1P49821 464 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 INHBCP55103 352 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 WNT3P56703 355 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 LOXL3P58215 753 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 TGFB2P61812 414 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 PURAQ00577 322 aaKnown RBP3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 TUBB3Q13509 450 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 TP53BP2Q13625 1128 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 GRM3Q14832 879 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 IQCB1Q15051 598 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 LLGL1Q15334 1064 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 GEN1Q17RS7 908 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 LONRF3Q496Y0 759 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 CRB2Q5IJ48 1285 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 SLC30A10Q6XR72 485 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 C11orf96Q7Z7L8 435 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 B3GALNT2Q8NCR0 500 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 FAM156AQ8NDB6 213 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 PSD4Q8NDX1 1056 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 PLBD2Q8NHP8 589 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 SMCR8Q8TEV9 937 aaPredicted RBP3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 IPCEF1Q8WWN9 437 aaPredicted RBP3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 MRGPRX1Q96LB2 322 aa3.32□□□□□ -1.88
RNU6-428P-201ENST00000362942 OSBPL9Q96SU4 736 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms