RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ARHGEF18Q6ZSZ5 1173 aa11.19□□□□□ -0.62
SMC3-201ENST00000361804 MORC4Q8TE76 937 aa11.19□□□□□ -0.62
SMC3-201ENST00000361804 SLCO2A1Q92959 643 aa11.19□□□□□ -0.62
SMC3-201ENST00000361804 FEM1BQ9UK73 627 aa11.19□□□□□ -0.62
SMC3-201ENST00000361804 TCRBV7S3A2A0A539 114 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 UNC5CO95185 931 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 T-ENOLP0DO92 83 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 BRD2P25440 801 aaKnown RBP11.18□□□□□ -0.62
SMC3-201ENST00000361804 PDIA2Q13087 525 aaKnown RBP11.18□□□□□ -0.62
SMC3-201ENST00000361804 ARHGEF16Q5VV41 709 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 RFWD3Q6PCD5 774 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 RFX8Q6ZV50 586 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 NLRX1Q86UT6 975 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 RSRC1Q96IZ7 334 aaKnown RBP11.18□□□□□ -0.62
SMC3-201ENST00000361804 PDCD2LQ9BRP1 358 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 NOP53Q9NZM5 478 aaKnown RBP11.18□□□□□ -0.62
SMC3-201ENST00000361804 ACO1P21399 889 aaKnown RBP11.18□□□□□ -0.62
SMC3-201ENST00000361804 ADRA1DP25100 572 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 TFDP1Q14186 410 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 MAPK6Q16659 721 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 CDR2LQ86X02 465 aaPredicted RBP11.18□□□□□ -0.62
SMC3-201ENST00000361804 C4orf19Q8IY42 314 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 MICAL1Q8TDZ2 1067 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 FNBP1Q96RU3 617 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 TARS2Q9BW92 718 aaKnown RBP11.18□□□□□ -0.62
SMC3-201ENST00000361804 PLVAPQ9BX97 442 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 POLR3FQ9H1D9 316 aaPredicted RBP11.18□□□□□ -0.62
SMC3-201ENST00000361804 PDLIM7Q9NR12 457 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 ZNF112Q9UJU3 913 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 WDR64B1ANS9 1081 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 CST3P01034 146 aaPredicted RBP11.18□□□□□ -0.62
SMC3-201ENST00000361804 ALADP13716 330 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 SP2Q02086 613 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 STRN3Q13033 797 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 RHOT1Q8IXI2 618 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 AGBL3Q8NEM8 1001 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 ZWILCHQ9H900 591 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 UBN1Q9NPG3 1134 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMC3-201ENST00000361804 PCDHB2Q9Y5E7 798 aa11.18□□□□□ -0.62
SMC3-201ENST00000361804 LRRD1A4D1F6 860 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 SGK1O00141 431 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 FZD9O00144 591 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 MAP3K13O43283 966 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 LIASO43766 372 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 KRT4P19013 534 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 MUTP22033 750 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 TNFSF9P41273 254 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 LIG4P49917 911 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 CENPCQ03188 943 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 NBPF12Q5TAG4 269 aaPredicted RBP11.17□□□□□ -0.62
SMC3-201ENST00000361804 LVRNQ6Q4G3 990 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 RBBP8NLQ8NC74 664 aaPredicted RBP11.17□□□□□ -0.62
SMC3-201ENST00000361804 RFWD2Q8NHY2 731 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 WDR83Q9BRX9 315 aaKnown RBP11.17□□□□□ -0.62
SMC3-201ENST00000361804 SLC5A4Q9NY91 659 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 SLC17A7Q9P2U7 560 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 PLXNA1Q9UIW2 1896 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 MAP3K6O95382 1288 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 CYP1A1P04798 512 aaPredicted RBP11.17□□□□□ -0.62
SMC3-201ENST00000361804 PDHA1P08559 390 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 CD48P09326 243 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 IL9RQ01113 521 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 RIPK1Q13546 671 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 MTMR2Q13614 643 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 CCNG2Q16589 344 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 TAF1BQ53T94 588 aaPredicted RBP11.17□□□□□ -0.62
SMC3-201ENST00000361804 FNBP1LQ5T0N5 605 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 CRELD2Q6UXH1 353 aaPredicted RBP11.17□□□□□ -0.62
SMC3-201ENST00000361804 KCTD17Q8N5Z5 321 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 CCDC89Q8N998 374 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 GRK7Q8WTQ7 553 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 PTPRN2Q92932 1015 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 ATG4CQ96DT6 458 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 SPDL1Q96EA4 605 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 ZNF214Q9UL59 606 aaPredicted RBP11.17□□□□□ -0.62
SMC3-201ENST00000361804 LRRIQ4A6NIV6 560 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 PIK3R2O00459 728 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 ATP4AP20648 1035 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 GTF2H1P32780 548 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 GPX6P59796 221 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 ALCAMQ13740 583 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 TAF5Q15542 800 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 OTOAQ7RTW8 1153 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 ZBTB33Q86T24 672 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 MTDHQ86UE4 582 aaKnown RBP11.17□□□□□ -0.62
SMC3-201ENST00000361804 LONP2Q86WA8 852 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 FAM13CQ8NE31 585 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 FBXL18Q96ME1 805 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 PXMP2Q9NR77 195 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 LGALS13Q9UHV8 139 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 EXOC7Q9UPT5 735 aa11.17□□□□□ -0.62
SMC3-201ENST00000361804 WEE2P0C1S8 567 aa11.16□□□□□ -0.62
SMC3-201ENST00000361804 ATP2A2P16615 1042 aaKnown RBP11.16□□□□□ -0.62
SMC3-201ENST00000361804 ATP5DP30049 168 aa11.16□□□□□ -0.62
SMC3-201ENST00000361804 PTP4A2Q12974 167 aa11.16□□□□□ -0.62
SMC3-201ENST00000361804 WDR44Q5JSH3 913 aa11.16□□□□□ -0.62
SMC3-201ENST00000361804 CROCCP2Q86T23 111 aa11.16□□□□□ -0.62
SMC3-201ENST00000361804 FAM160B2Q86V87 743 aa11.16□□□□□ -0.62
SMC3-201ENST00000361804 ZCCHC9Q8N567 271 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms