RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SMAD1Q15797 465 aaKnown RBP13.38□□□□□ -0.27
VAMP1-201ENST00000361716 RABGAP1LQ5R372 815 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 RAPH1Q70E73 1250 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 SLC47A2Q86VL8 602 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 ZSWIM2Q8NEG5 633 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 CPA5Q8WXQ8 436 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 CBWD1Q9BRT8 395 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 GRIP2Q9C0E4 1043 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 NARFQ9UHQ1 456 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 APPL1Q9UKG1 709 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 PACSIN3Q9UKS6 424 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 ASTN1O14525 1302 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 MYOCOSA0A1B0GUC4 107 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 FAM237BA0A1B0GVD1 139 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 EDIL3O43854 480 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 EYA4O95677 639 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 ETS1P14921 441 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 PDIA2Q13087 525 aaKnown RBP13.37□□□□□ -0.27
VAMP1-201ENST00000361716 EFTUD2Q15029 972 aaKnown RBP eCLIP13.37□□□□□ -0.27
VAMP1-201ENST00000361716 PDK4Q16654 411 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 SLC45A4Q5BKX6 768 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 FAM102BQ5T8I3 360 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 TRIM67Q6ZTA4 783 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 DPH6Q7L8W6 267 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 ATL2Q8NHH9 583 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 CCDC97Q96F63 343 aaPredicted RBP13.37□□□□□ -0.27
VAMP1-201ENST00000361716 SLC17A7Q9P2U7 560 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 IKBKGQ9Y6K9 419 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 COMMD3-BMI1R4GMX3 469 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 PCNTO95613 3336 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 FCHO1O14526 889 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 PDE5AO76074 875 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 FGFR1P11362 822 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 MYCLP12524 364 aaPredicted RBP13.37□□□□□ -0.27
VAMP1-201ENST00000361716 HOXD13P35453 343 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 MXI1P50539 228 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 CBX3Q13185 183 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 MFSD4BQ5TF39 518 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 TRABD2AQ86V40 505 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 RBM12BQ8IXT5 1001 aaKnown RBP13.37□□□□□ -0.27
VAMP1-201ENST00000361716 TCP10LQ8TDR4 215 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 GCNAQ96QF7 691 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 MIS12Q9H081 205 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 ZNF212Q9UDV6 495 aa13.37□□□□□ -0.27
VAMP1-201ENST00000361716 PAIP2BQ9ULR5 123 aaKnown RBP13.37□□□□□ -0.27
VAMP1-201ENST00000361716 RALAP11233 206 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 BGNP21810 368 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 CDC16Q13042 620 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 RASA2Q15283 850 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 SCUBE1Q8IWY4 988 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 SMC1BQ8NDV3 1235 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 ZNF577Q9BSK1 485 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 WNT8AQ9H1J5 351 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 MANSC1Q9H8J5 431 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 GPRC5CQ9NQ84 441 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 TMCO1Q9UM00 188 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 NEU2Q9Y3R4 380 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 SLC16A4O15374 487 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 GH2P01242 217 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 PEX3P56589 373 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 GPS1Q13098 491 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 SLC44A4Q53GD3 710 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 C1QTNF12Q5T7M4 302 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 POU5F2Q8N7G0 328 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 GSTCDQ8NEC7 633 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 IFT43Q96FT9 208 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 IWS1Q96ST2 819 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 MAK16Q9BXY0 300 aaKnown RBP13.36□□□□□ -0.27
VAMP1-201ENST00000361716 NMUR2Q9GZQ4 415 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 TOPORSQ9NS56 1045 aaPredicted RBP13.36□□□□□ -0.27
VAMP1-201ENST00000361716 WHRNQ9P202 907 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.36□□□□□ -0.27
VAMP1-201ENST00000361716 RGS17Q9UGC6 210 aaPredicted RBP13.36□□□□□ -0.27
VAMP1-201ENST00000361716 CTDP1Q9Y5B0 961 aaPredicted RBP13.36□□□□□ -0.27
VAMP1-201ENST00000361716 ESYT2A0FGR8 921 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 SIGLEC16A6NMB1 481 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 BOLA2-SMG1P6H3BVE0 249 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 TGFB1I1O43294 461 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 BMP3P12645 472 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 RPA1P27694 616 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 MAGEA8P43361 318 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 RHBDL3P58872 404 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 FAM111AQ96PZ2 611 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 AGPAT3Q9NRZ7 376 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 POLLQ9UGP5 575 aa13.36□□□□□ -0.27
VAMP1-201ENST00000361716 STAMBPO95630 424 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 SPATA31C1P0DKV0 1188 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 JAM2P57087 298 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 PPP4CP60510 307 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 NCOA4Q13772 614 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 ZNF394Q53GI3 561 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 TMEM63BQ5T3F8 832 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 LRRC8BQ6P9F7 803 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 PPP1R14CQ8TAE6 165 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 HSPBAP1Q96EW2 488 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 C10orf88Q9H8K7 445 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 GINM1Q9NU53 330 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 ADGRA3Q8IWK6 1321 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 COL5A3P25940 1745 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-201ENST00000361716 ASLP04424 464 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms