RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 COL17A1Q9UMD9 1497 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-201ENST00000360228 PRCPP42785 496 aa18.03■□□□□ 0.48
CACNA1A-201ENST00000360228 NANOGNBQ7Z5D8 188 aa18.03■□□□□ 0.48
CACNA1A-201ENST00000360228 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.03■□□□□ 0.48
CACNA1A-201ENST00000360228 EAF2Q96CJ1 260 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-201ENST00000360228 ZNF668Q96K58 619 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-201ENST00000360228 GPR63Q9BZJ6 419 aa18.03■□□□□ 0.48
CACNA1A-201ENST00000360228 A0A1W2PRG6 482 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 NKX1-1Q15270 411 aaPredicted RBP18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 TUBA8Q9NY65 449 aaPredicted RBP18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 ABCA5Q8WWZ7 1642 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 POTEMA6NI47 508 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 PDE8BO95263 885 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 POU1F1P28069 291 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 DUOXA2Q1HG44 320 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 PGS1Q32NB8 556 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 PADI6Q6TGC4 694 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 RIC8BQ9NVN3 520 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 A0A087X0T9 212 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 SMNDC1O75940 238 aaKnown RBP eCLIP18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 ARHGEF26Q96DR7 871 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 ADI1Q9BV57 179 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 KLHL1Q9NR64 748 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 TMCC3Q9ULS5 477 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 KRT20P35900 424 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 COASYQ13057 564 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 KNOP1Q1ED39 458 aaKnown RBP18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 FAM160B2Q86V87 743 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 SEC16BQ96JE7 1060 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 CATSPER2Q96P56 530 aa18.02■□□□□ 0.48
CACNA1A-201ENST00000360228 SERPINB5P36952 375 aa18.02■□□□□ 0.47
CACNA1A-201ENST00000360228 NDUFAF6Q330K2 333 aa18.02■□□□□ 0.47
CACNA1A-201ENST00000360228 ZCWPW2Q504Y3 356 aa18.02■□□□□ 0.47
CACNA1A-201ENST00000360228 C3orf62Q6ZUJ4 267 aa18.02■□□□□ 0.47
CACNA1A-201ENST00000360228 SH2B2O14492 632 aaPredicted RBP18.02■□□□□ 0.47
CACNA1A-201ENST00000360228 DYRK3O43781 588 aa18.02■□□□□ 0.47
CACNA1A-201ENST00000360228 TARSP26639 723 aaKnown RBP18.02■□□□□ 0.47
CACNA1A-201ENST00000360228 MDH1P40925 334 aaKnown RBP18.02■□□□□ 0.47
CACNA1A-201ENST00000360228 MAGEA10P43363 369 aaPredicted RBP18.02■□□□□ 0.47
CACNA1A-201ENST00000360228 SDE2Q6IQ49 451 aa18.02■□□□□ 0.47
CACNA1A-201ENST00000360228 ZNF589Q86UQ0 364 aaPredicted RBP18.02■□□□□ 0.47
CACNA1A-201ENST00000360228 TRIM51Q9BSJ1 452 aa18.02■□□□□ 0.47
CACNA1A-201ENST00000360228 LEMD3Q9Y2U8 911 aa18.02■□□□□ 0.47
CACNA1A-201ENST00000360228 MAST1Q9Y2H9 1570 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 MYOM2P54296 1465 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 BAG6P46379 1132 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 HIST2H2ACQ16777 129 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 HIST2H2AA3Q6FI13 130 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 GAS2L3Q86XJ1 694 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 EPHX4Q8IUS5 362 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 XPO6Q96QU8 1125 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 CCT8L2Q96SF2 557 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 NMRK1Q9NWW6 199 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 LSM7Q9UK45 103 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 ERVV-2B6SEH9 535 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 LGALS3BPQ08380 585 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 SYDE1Q6ZW31 735 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 C4orf33Q8N1A6 199 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 ING3Q9NXR8 418 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 SLC30A1Q9Y6M5 507 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 RNF123Q5XPI4 1314 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 PRR23AA6NEV1 266 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 PRPF3O43395 683 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 PARNO95453 639 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 PTPN7P35236 360 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 PHACTR1Q9C0D0 580 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 MAP10Q9P2G4 905 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 SPACA6W5XKT8 324 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 MLH3Q9UHC1 1453 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 AP3B2Q13367 1082 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 ZBTB10Q96DT7 871 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 MXD3Q9BW11 206 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 CTNNAL1Q9UBT7 734 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 MKRN4PQ13434 485 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 CACHD1Q5VU97 1274 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 EFHD2Q96C19 240 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 CEP44Q9C0F1 390 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 TPST1O60507 370 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 PIK3R1P27986 724 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 SLC25A41Q8N5S1 370 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 DYNLL2Q96FJ2 89 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 SPATA33Q96N06 139 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 C2orf40Q9H1Z8 148 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 COPRSQ9NQ92 184 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 RPN2P04844 631 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 ANXA11P50995 505 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 PPIDQ08752 370 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 ARID5BQ14865 1188 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 ZNF57Q68EA5 555 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 L3MBTL3Q96JM7 780 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 SH3GLB2Q9NR46 395 aa18.01■□□□□ 0.47
CACNA1A-201ENST00000360228 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
CACNA1A-201ENST00000360228 PRRG1O14668 218 aa18■□□□□ 0.47
CACNA1A-201ENST00000360228 ZNF438Q7Z4V0 828 aa18■□□□□ 0.47
CACNA1A-201ENST00000360228 DHX40Q8IX18 779 aaKnown RBP18■□□□□ 0.47
CACNA1A-201ENST00000360228 CACTIN-AS1Q8N1I8 211 aa18■□□□□ 0.47
CACNA1A-201ENST00000360228 TTC39CQ8N584 583 aa18■□□□□ 0.47
CACNA1A-201ENST00000360228 ATL2Q8NHH9 583 aa18■□□□□ 0.47
CACNA1A-201ENST00000360228 IARS2Q9NSE4 1012 aaKnown RBP18■□□□□ 0.47
CACNA1A-201ENST00000360228 PFASO15067 1338 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms