RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 CYP27B1O15528 508 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 RHOBTB1O94844 696 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 PDGFRBP09619 1106 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 MYL2P10916 166 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 RPS6P62753 249 aaKnown RBP10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CAMK2GQ13555 558 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-202ENST00000358808 LMBRD2Q68DH5 695 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-202ENST00000358808 ZNF544Q6NX49 715 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 EMBQ6PCB8 327 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 SIX5Q8N196 739 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 STAMBPL1Q96FJ0 436 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 EPN3Q9H201 632 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CATSPERBQ9H7T0 1116 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 CYP39A1Q9NYL5 469 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 WWOXQ9NZC7 414 aa10.64□□□□□ -0.71
CLIP1-202ENST00000358808 H7C1W4 665 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 KLHL18O94889 574 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 MCAMP43121 646 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 ERFP50548 548 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 RAD23BP54727 409 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 PANX2Q96RD6 677 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 WNT8AQ9H1J5 351 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 ERN1O75460 977 aaKnown RBP10.63□□□□□ -0.71
CLIP1-202ENST00000358808 ATP1A3P13637 1013 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 C4BPBP20851 252 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 FEN1P39748 380 aaKnown RBP10.63□□□□□ -0.71
CLIP1-202ENST00000358808 DRAP1Q14919 205 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-202ENST00000358808 GLB1LQ6UWU2 654 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 C20orf96Q9NUD7 363 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-202ENST00000358808 PPIEQ9UNP9 301 aaKnown RBP10.63□□□□□ -0.71
CLIP1-202ENST00000358808 TECPR2O15040 1411 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 GRK2P25098 689 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 PRDX5P30044 214 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 BFSP2Q13515 415 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 TOMM20Q15388 145 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 TERF2Q15554 542 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 CELF1Q92879 486 aaKnown RBP10.63□□□□□ -0.71
CLIP1-202ENST00000358808 MXD3Q9BW11 206 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 RIC8BQ9NVN3 520 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 UVRAGQ9P2Y5 699 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 PNPLA6Q8IY17 1366 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 PGM1P36871 562 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 GPR1P46091 355 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 CDC42EP1Q00587 391 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 KCNH2Q12809 1159 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 SLC44A4Q53GD3 710 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 VSTM4Q8IW00 320 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 C19orf60Q96EN9 201 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 PARK7Q99497 189 aaKnown RBP10.63□□□□□ -0.71
CLIP1-202ENST00000358808 NMRK2Q9NPI5 230 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 UTYO14607 1347 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 CYP7B1O75881 506 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 CYP19A1P11511 503 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-202ENST00000358808 EFNA5P52803 228 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 ARL6IP4Q66PJ3 421 aaKnown RBP10.63□□□□□ -0.71
CLIP1-202ENST00000358808 CLYBLQ8N0X4 340 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 IPMKQ8NFU5 416 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 OXCT2Q9BYC2 517 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-202ENST00000358808 RERGLQ9H628 205 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 MCM8Q9UJA3 840 aa10.63□□□□□ -0.71
CLIP1-202ENST00000358808 POTECB2RU33 542 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 PSMD12O00232 456 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 KCNQ2O43526 872 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 SYNCRIPO60506 623 aaKnown RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 LARGE1O95461 756 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 ITGAXP20702 1163 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 SERPINB3P29508 390 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 RANBP1P43487 201 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 NT5C2P49902 561 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 RBP5P82980 135 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 POU4F1Q01851 419 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 UGP2Q16851 508 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 KNOP1Q1ED39 458 aaKnown RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 RABGAP1LQ5R372 815 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 TDRD10Q5VZ19 366 aaKnown RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 C16orf89Q6UX73 402 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 PCYOX1LQ8NBM8 494 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 SCFD2Q8WU76 684 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 RBBP8Q99708 897 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 RCOR1Q9UKL0 485 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 ZBTB12Q9Y330 459 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 PPLO60437 1756 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 ITIH6Q6UXX5 1313 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 M0R3G1 203 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 VWA5AO00534 786 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 TBC1D12O60347 775 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 FLT3P36888 993 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 STAT5BP51692 787 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 ATP12AP54707 1039 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 SYTL1Q8IYJ3 562 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 LINC00301Q8NCQ3 95 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 MRPL48Q96GC5 212 aaKnown RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 ETNK1Q9HBU6 452 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 IMPAD1Q9NX62 359 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 SKAP2O75563 359 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 TCN1P20061 433 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 DDX39BQ13838 428 aaKnown RBP10.62□□□□□ -0.71
CLIP1-202ENST00000358808 WDR72Q3MJ13 1102 aa10.62□□□□□ -0.71
CLIP1-202ENST00000358808 CYP4A22Q5TCH4 519 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms