RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.73□□□□□ -0.37
SYN3-202ENST00000358763 UNC93B1Q9H1C4 597 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 ERVK-5Q9HDB9 667 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 MTA2O94776 668 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 STAU1O95793 577 aaKnown RBP12.73□□□□□ -0.37
SYN3-202ENST00000358763 KCNE1P15382 129 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 COMTP21964 271 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 MARCKSL1P49006 195 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 TCEAL1Q15170 157 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 XKR4Q5GH76 650 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 C11orf63Q6NUN7 778 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 SPATA4Q8NEY3 305 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 HEXIM2Q96MH2 286 aaKnown RBP12.73□□□□□ -0.37
SYN3-202ENST00000358763 GAD1Q99259 594 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 ANKZF1Q9H8Y5 726 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 UVRAGQ9P2Y5 699 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 BARX2Q9UMQ3 279 aaPredicted RBP12.73□□□□□ -0.37
SYN3-202ENST00000358763 SPTLC1O15269 473 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 ITGA4P13612 1032 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 MRPS25P82663 173 aaKnown RBP12.73□□□□□ -0.37
SYN3-202ENST00000358763 PTP4A2Q12974 167 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 CFAP221Q4G0U5 840 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 PHF13Q86YI8 300 aaPredicted RBP12.73□□□□□ -0.37
SYN3-202ENST00000358763 WDTC1Q8N5D0 677 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 GPR161Q8N6U8 529 aaKnown RBP12.73□□□□□ -0.37
SYN3-202ENST00000358763 LRRC52Q8N7C0 313 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 TMEM35BQ8NCS4 154 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 KRT35Q92764 455 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 TRIM11Q96F44 468 aa12.73□□□□□ -0.37
SYN3-202ENST00000358763 DDX3YO15523 660 aaKnown RBP12.72□□□□□ -0.37
SYN3-202ENST00000358763 HCRTO43612 131 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 PAEPP09466 180 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 MYBL1P10243 752 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 INCA1Q0VD86 236 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 LIN9Q5TKA1 542 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 FAXDC2Q96IV6 333 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 PARD6BQ9BYG5 372 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 AVENQ9NQS1 362 aaPredicted RBP12.72□□□□□ -0.37
SYN3-202ENST00000358763 PCDHGC3Q9UN70 934 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 SPOPO43791 374 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 LSM8O95777 96 aaKnown RBP12.72□□□□□ -0.37
SYN3-202ENST00000358763 CD4P01730 458 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 RPLP2P05387 115 aaKnown RBP12.72□□□□□ -0.37
SYN3-202ENST00000358763 MMP8P22894 467 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 IGFBP6P24592 240 aaPredicted RBP12.72□□□□□ -0.37
SYN3-202ENST00000358763 PRMT2P55345 433 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 ZNF211Q13398 564 aaPredicted RBP12.72□□□□□ -0.37
SYN3-202ENST00000358763 CYP4A22Q5TCH4 519 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 DCAF12L1Q5VU92 463 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 C12orf29Q8N999 325 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 ALG3Q92685 438 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 PNKPQ96T60 521 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 TSEN34Q9BSV6 310 aaKnown RBP12.72□□□□□ -0.37
SYN3-202ENST00000358763 CHST12Q9NRB3 414 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 RBM12Q9NTZ6 932 aaKnown RBP12.72□□□□□ -0.37
SYN3-202ENST00000358763 TJP2Q9UDY2 1190 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 CYTH4Q9UIA0 394 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 CEP83Q9Y592 693 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 NME7Q9Y5B8 376 aa12.72□□□□□ -0.37
SYN3-202ENST00000358763 PIRO00625 290 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 XPOTO43592 962 aaKnown RBP12.71□□□□□ -0.37
SYN3-202ENST00000358763 CKBP12277 381 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 C1QBPQ07021 282 aaKnown RBP12.71□□□□□ -0.37
SYN3-202ENST00000358763 MTFR1Q15390 333 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 DAB2IPQ5VWQ8 1189 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 PDCL2Q8N4E4 241 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 RPGRIP1Q96KN7 1286 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 RPS6KC1Q96S38 1066 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 ADAM2Q99965 735 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 KBTBD13C9JR72 458 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 M0QYV0 167 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 MED7O43513 233 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 MICAL2O94851 1124 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 ATF7P17544 494 aaPredicted RBP12.71□□□□□ -0.37
SYN3-202ENST00000358763 SOWAHAQ2M3V2 549 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 AGMOQ6ZNB7 445 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 ZNF572Q7Z3I7 529 aaPredicted RBP12.71□□□□□ -0.37
SYN3-202ENST00000358763 ACOT1Q86TX2 421 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 PBKQ96KB5 322 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 PPP1R10Q96QC0 940 aaKnown RBP12.71□□□□□ -0.37
SYN3-202ENST00000358763 HINFPQ9BQA5 517 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 LPIN3Q9BQK8 851 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 NT5C1AQ9BXI3 368 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 MIOSQ9NXC5 875 aa12.71□□□□□ -0.37
SYN3-202ENST00000358763 A0A0U1RQG5 324 aaPredicted RBP12.71□□□□□ -0.38
SYN3-202ENST00000358763 SCNN1GP51170 649 aa12.71□□□□□ -0.38
SYN3-202ENST00000358763 MAMLD1Q13495 774 aa12.71□□□□□ -0.38
SYN3-202ENST00000358763 PTPN20Q4JDL3 420 aa12.71□□□□□ -0.38
SYN3-202ENST00000358763 SGO2Q562F6 1265 aa12.71□□□□□ -0.38
SYN3-202ENST00000358763 AADACL2Q6P093 401 aa12.71□□□□□ -0.38
SYN3-202ENST00000358763 ERICH1Q86X53 443 aa12.71□□□□□ -0.38
SYN3-202ENST00000358763 HACE1Q8IYU2 909 aa12.71□□□□□ -0.38
SYN3-202ENST00000358763 GSTCDQ8NEC7 633 aa12.71□□□□□ -0.38
SYN3-202ENST00000358763 OR6B3Q8NGW1 331 aa12.71□□□□□ -0.38
SYN3-202ENST00000358763 UBA3Q8TBC4 463 aa12.71□□□□□ -0.38
SYN3-202ENST00000358763 ZNF560Q96MR9 790 aa12.71□□□□□ -0.38
SYN3-202ENST00000358763 FAM49BQ9NUQ9 324 aa12.71□□□□□ -0.38
SYN3-202ENST00000358763 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.71□□□□□ -0.38
SYN3-202ENST00000358763 ARL5CA6NH57 179 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms