RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 WDR35Q9P2L0 1181 aa14.14□□□□□ -0.15
NFIX-201ENST00000358552 CNOT8Q9UFF9 292 aaKnown RBP14.14□□□□□ -0.15
NFIX-201ENST00000358552 TTC7AQ9ULT0 858 aaPredicted RBP14.14□□□□□ -0.15
NFIX-201ENST00000358552 GIT1Q9Y2X7 761 aa14.14□□□□□ -0.15
NFIX-201ENST00000358552 ANK1P16157 1881 aa14.14□□□□□ -0.15
NFIX-201ENST00000358552 ZNF623O75123 536 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 CILPO75339 1184 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 FGFR4P22455 802 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 NOMO3P69849 1222 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 MGAT3Q09327 533 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 PALB2Q86YC2 1186 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 ZNF564Q8TBZ8 553 aaPredicted RBP14.13□□□□□ -0.15
NFIX-201ENST00000358552 SH3TC2Q8TF17 1288 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 TMEM40Q8WWA1 233 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 PGBD4Q96DM1 585 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 TMEM176AQ96HP8 235 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 PARVAQ9NVD7 372 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 ADAM22Q9P0K1 906 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 PARP2Q9UGN5 583 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 ST3GAL5Q9UNP4 418 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 STXBP5LQ9Y2K9 1186 aa14.13□□□□□ -0.15
NFIX-201ENST00000358552 NOC2LQ9Y3T9 749 aaKnown RBP14.13□□□□□ -0.15
NFIX-201ENST00000358552 SMIM28A0A1B0GU29 152 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 MYO1FO00160 1098 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 BUB1BO60566 1050 aaPredicted RBP14.12□□□□□ -0.15
NFIX-201ENST00000358552 SASH3O75995 380 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 CTCFP49711 727 aaPredicted RBP14.12□□□□□ -0.15
NFIX-201ENST00000358552 CNGA2Q16280 664 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 UBXN11Q5T124 520 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 CTU1Q7Z7A3 348 aaKnown RBP14.12□□□□□ -0.15
NFIX-201ENST00000358552 MMGT1Q8N4V1 131 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 CYFIP2Q96F07 1278 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 NUP85Q9BW27 656 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 NT5C1AQ9BXI3 368 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 GDAP2Q9NXN4 497 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.12□□□□□ -0.15
NFIX-201ENST00000358552 IPPQ9Y573 584 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 ALG6Q9Y672 507 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 RALGAPA2Q2PPJ7 1873 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 CCDC188H7C350 402 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 PIRO00625 290 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 POLR3GO15318 223 aaPredicted RBP14.12□□□□□ -0.15
NFIX-201ENST00000358552 FTCDO95954 541 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 IVLP07476 585 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 WEE2P0C1S8 567 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 HSPA1AP0DMV8 641 aaKnown RBP14.12□□□□□ -0.15
NFIX-201ENST00000358552 HSPA1BP0DMV9 641 aaKnown RBP14.12□□□□□ -0.15
NFIX-201ENST00000358552 CD58P19256 250 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 MMP8P22894 467 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 LRPAP1P30533 357 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 THPOP40225 353 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 LBX1P52954 281 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 SV2CQ496J9 727 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 C9orf57Q5W0N0 161 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 LHX8Q68G74 356 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 MON1BQ7L1V2 547 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 MRPL10Q7Z7H8 261 aaKnown RBP14.12□□□□□ -0.15
NFIX-201ENST00000358552 SLC43A3Q8NBI5 491 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 OSGEPQ9NPF4 335 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 FAM105AQ9NUU6 356 aa14.12□□□□□ -0.15
NFIX-201ENST00000358552 UMODL1Q5DID0 1318 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 ARHGEF37A1IGU5 675 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 KBTBD13C9JR72 458 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 KCNK3O14649 394 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 MEFVO15553 781 aaPredicted RBP14.11□□□□□ -0.15
NFIX-201ENST00000358552 CHRNA1P02708 482 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 ITGA4P13612 1032 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 TAF6P49848 677 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 GSCP56915 257 aaPredicted RBP14.11□□□□□ -0.15
NFIX-201ENST00000358552 PAK2Q13177 524 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 CASP8Q14790 479 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 PKN2Q16513 984 aaKnown RBP14.11□□□□□ -0.15
NFIX-201ENST00000358552 FBXO47Q5MNV8 452 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 NAA35Q5VZE5 725 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 PLEKHA7Q6IQ23 1121 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 LEKR1Q6ZMV7 388 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 RASGEF1CQ8N431 466 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 SPATA4Q8NEY3 305 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.11□□□□□ -0.15
NFIX-201ENST00000358552 ARHGEF26Q96DR7 871 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 MMS19Q96T76 1030 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.11□□□□□ -0.15
NFIX-201ENST00000358552 NXF3Q9H4D5 531 aaKnown RBP14.11□□□□□ -0.15
NFIX-201ENST00000358552 ACP6Q9NPH0 428 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 DNAH12Q6ZR08 3092 aa14.11□□□□□ -0.15
NFIX-201ENST00000358552 A6NNZ2 444 aa14.1□□□□□ -0.15
NFIX-201ENST00000358552 PGRMC1O00264 195 aaKnown RBP14.1□□□□□ -0.15
NFIX-201ENST00000358552 SRGAP2O75044 1071 aa14.1□□□□□ -0.15
NFIX-201ENST00000358552 RHOXF2BP0C7M4 288 aa14.1□□□□□ -0.15
NFIX-201ENST00000358552 SETSIPP0DME0 302 aa14.1□□□□□ -0.15
NFIX-201ENST00000358552 CTNNA2P26232 953 aa14.1□□□□□ -0.15
NFIX-201ENST00000358552 RPL9P32969 192 aaKnown RBP14.1□□□□□ -0.15
NFIX-201ENST00000358552 MAN1A1P33908 653 aa14.1□□□□□ -0.15
NFIX-201ENST00000358552 RAD23BP54727 409 aa14.1□□□□□ -0.15
NFIX-201ENST00000358552 NFX1Q12986 1120 aaKnown RBP14.1□□□□□ -0.15
NFIX-201ENST00000358552 TUBB8Q3ZCM7 444 aa14.1□□□□□ -0.15
NFIX-201ENST00000358552 SGO2Q562F6 1265 aa14.1□□□□□ -0.15
NFIX-201ENST00000358552 ERICH1Q86X53 443 aa14.1□□□□□ -0.15
NFIX-201ENST00000358552 SMG8Q8ND04 991 aaKnown RBP14.1□□□□□ -0.15
NFIX-201ENST00000358552 SPATA18Q8TC71 538 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms