RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 RGS4P49798 205 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 STK4Q13043 487 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 BTG3Q14201 252 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 ATP13A4Q4VNC1 1196 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 CYP20A1Q6UW02 462 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 GRAMD1CQ8IYS0 662 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 ST13P4Q8IZP2 240 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 GTPBP2Q9BX10 602 aaKnown RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 PAIP1Q9H074 479 aaKnown RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 EMILIN3Q9NT22 766 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 NSMCE4AQ9NXX6 385 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 SPATA2Q9UM82 520 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 FGD5Q6ZNL6 1462 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 TBC1D3BA6NDS4 549 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 PDHA1P08559 390 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 CNPP09543 421 aaKnown RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 DR1Q01658 176 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 CCDC184Q52MB2 194 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 NUGGCQ68CJ6 796 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 TYW3Q6IPR3 259 aaKnown RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 ZNF746Q6NUN9 644 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 ZNF544Q6NX49 715 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 EPM2AIP1Q7L775 607 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 FAM20CQ8IXL6 584 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 TMEM143Q96AN5 459 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 AK8Q96MA6 479 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 C2orf40Q9H1Z8 148 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 GBA2Q9HCG7 927 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 GGA3Q9NZ52 723 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 PKD2L2Q9NZM6 624 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 CNOT8Q9UFF9 292 aaKnown RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 ANKRD36BQ8N2N9 1353 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 H3BRB1 525 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 KRT37O76014 449 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 OR7A10O76100 309 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 MTA2O94776 668 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 AMHP03971 560 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 LBPP18428 481 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 XRCC4Q13426 336 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 ARID5BQ14865 1188 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 GLRA4Q5JXX5 417 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 NT5DC3Q86UY8 548 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 PROSER1Q86XN7 944 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 RCOR2Q8IZ40 523 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 FAM9CQ8IZT9 166 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 ZNF354BQ96LW1 612 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 EHD2Q9NZN4 543 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 RNF14Q9UBS8 474 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 VPS28Q9UK41 221 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 USP17L15C9J2P7 530 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 USP17L13C9JLJ4 530 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 USP17L11C9JVI0 530 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 USP17L18D6R9N7 530 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 USP17L22D6RA61 530 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 USP17L17D6RBQ6 530 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 USP17L19D6RCP7 530 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 USP17L20D6RJB6 530 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 MAPK13O15264 365 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 GYG2O15488 501 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 PRKAB2O43741 272 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CDC40O60508 579 aaKnown RBP eCLIP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 PRKCBP05771 671 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SERPINH1P50454 418 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 MYBPC1Q00872 1141 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 POU4F1Q01851 419 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 USP17L24Q0WX57 530 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 TRIM25Q14258 630 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 ANKFN1Q8N957 763 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 C12orf50Q8NA57 414 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 ABHD5Q8WTS1 349 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SH3GL2Q99962 352 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 PDCD10Q9BUL8 212 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 PIF1Q9H611 641 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 YY1AP1Q9H869 796 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 ZNF624Q9P2J8 865 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SH3BGRL2Q9UJC5 107 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 ZNF711Q9Y462 761 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 FLT4P35916 1363 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 KIAA1107Q9UPP5 1409 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 NESP48681 1621 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 H7C4K7 107 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 BBOX1O75936 387 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 HIST1H2ABP04908 130 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 GRK4P32298 578 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 ELK3P41970 407 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 ABCE1P61221 599 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 GPS1Q13098 491 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 DYNC1I2Q13409 638 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 HIBCHQ6NVY1 386 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 HIST3H2AQ7L7L0 130 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 HEATR4Q86WZ0 1026 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 HPS6Q86YV9 775 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 OSCP1Q8WVF1 389 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 HIST1H2ACQ93077 130 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 MAML3Q96JK9 1138 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 NEK6Q9HC98 313 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 PTPRHQ9HD43 1115 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CCDC177Q9NQR7 707 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CYP26B1Q9NR63 512 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 NSD2O96028 1365 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms