RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 F8VP50 259 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 MED7O43513 233 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 PSTPIP1O43586 416 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 OPHN1O60890 802 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 KRT37O76014 449 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 RBP3P10745 1247 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 SKIP12755 728 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 TAS2R40P59535 323 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 NCALDP61601 193 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 PTK6Q13882 451 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 TAF1BQ53T94 588 aaPredicted RBP7.19□□□□□ -1.26
RTN4-203ENST00000357376 XKR3Q5GH77 459 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 FAM160B1Q5W0V3 765 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 AGGF1Q8N302 714 aaeCLIP7.19□□□□□ -1.26
RTN4-203ENST00000357376 SREK1Q8WXA9 508 aaKnown RBP7.19□□□□□ -1.26
RTN4-203ENST00000357376 FAM149B1Q96BN6 582 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 FAM111AQ96PZ2 611 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 FHDC1Q9C0D6 1143 aaPredicted RBP7.19□□□□□ -1.26
RTN4-203ENST00000357376 MTMR12Q9C0I1 747 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 MTFR1LQ9H019 292 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 LRRC19Q9H756 370 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 CYP26B1Q9NR63 512 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 C15orf41Q9Y2V0 281 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 IVNS1ABPQ9Y6Y0 642 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 CACNA1SQ13698 1873 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 KDM4FA0A1W2PPD8 638 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 O00370 1275 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 ENO1P06733 434 aaKnown RBP7.19□□□□□ -1.26
RTN4-203ENST00000357376 APRTP07741 180 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 KRT7P08729 469 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 P4HA1P13674 534 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 EPHB2P29323 1055 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 ACTR2P61160 394 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 GTF2BQ00403 316 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 PTK7Q13308 1070 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 PGM5Q15124 567 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 STXBP2Q15833 593 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 DUOXA2Q1HG44 320 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 CIAPIN1Q6FI81 312 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 PPP1R2P3Q6NXS1 205 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 GADL1Q6ZQY3 521 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 PCGF5Q86SE9 256 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 NME8Q8N427 588 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 LRRC71Q8N4P6 559 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 TTC13Q8NBP0 860 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 TMEM161BQ8NDZ6 487 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 FBXO36Q8NEA4 188 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 TTC16Q8NEE8 873 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 SPATA18Q8TC71 538 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 TMC2Q8TDI7 906 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 APOL6Q9BWW8 343 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 RANBP17Q9H2T7 1088 aaKnown RBP7.19□□□□□ -1.26
RTN4-203ENST00000357376 RAB6BQ9NRW1 208 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 DMAC2Q9NW81 257 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.19□□□□□ -1.26
RTN4-203ENST00000357376 SCOCQ9UIL1 159 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 MAP3K7O43318 606 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 CHRNB2P17787 502 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 RPA3P35244 121 aaPredicted RBP7.19□□□□□ -1.26
RTN4-203ENST00000357376 GPC3P51654 580 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 GEMIN4P57678 1058 aaKnown RBP7.19□□□□□ -1.26
RTN4-203ENST00000357376 RPL7AP62424 266 aaKnown RBP7.19□□□□□ -1.26
RTN4-203ENST00000357376 OTUD4Q01804 1114 aaKnown RBP7.19□□□□□ -1.26
RTN4-203ENST00000357376 ROR1Q01973 937 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 TFDP1Q14186 410 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 EAPPQ56P03 285 aaPredicted RBP7.19□□□□□ -1.26
RTN4-203ENST00000357376 SESTD1Q86VW0 696 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 ZNF677Q86XU0 584 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 SIAH1Q8IUQ4 282 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 MAP4K3Q8IVH8 894 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 CCDC33Q8N5R6 958 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 ACTL9Q8TC94 416 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 PPP4R1Q8TF05 950 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 CCDC124Q96CT7 223 aaKnown RBP7.19□□□□□ -1.26
RTN4-203ENST00000357376 RMDN2Q96LZ7 410 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 RPF1Q9H9Y2 349 aaKnown RBP7.19□□□□□ -1.26
RTN4-203ENST00000357376 HEY2Q9UBP5 337 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 HESX1Q9UBX0 185 aa7.19□□□□□ -1.26
RTN4-203ENST00000357376 A6NJR5 290 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 FSCN2O14926 492 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 KIF1CO43896 1103 aaKnown RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 PAEPP09466 180 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 ADRA1DP25100 572 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 GCLCP48506 637 aaPredicted RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 EPHB1P54762 984 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 SNRPFP62306 86 aaKnown RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 C6orf89Q6UWU4 347 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 ABRAQ8N0Z2 381 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 RIBC1Q8N443 379 aaPredicted RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 FITM2Q8N6M3 262 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 CCNYQ8ND76 341 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 EXD1Q8NHP7 514 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 DEPDC1BQ8WUY9 529 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 PAFAH2Q99487 392 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 METTL5Q9NRN9 209 aaKnown RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 DDX56Q9NY93 547 aaKnown RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 NOCTQ9UK39 431 aaKnown RBP7.18□□□□□ -1.26
RTN4-203ENST00000357376 STRIP2Q9ULQ0 834 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 AGAP1Q9UPQ3 857 aa7.18□□□□□ -1.26
RTN4-203ENST00000357376 AKT3Q9Y243 479 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms