RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ANKLE1Q8NAG6 615 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 GLIS1Q8NBF1 620 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 FBXL13Q8NEE6 735 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 TTC8Q8TAM2 541 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 MORC4Q8TE76 937 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 UTP4Q969X6 686 aaKnown RBP8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 UBN1Q9NPG3 1134 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 CHKBQ9Y259 395 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 CLRN2A0PK11 232 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 SUPT3HO75486 399 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 MYCLP12524 364 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 POLGP54098 1239 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 GPS1Q13098 491 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 SPARCL1Q14515 664 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 TAF1BQ53T94 588 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 PCNX4Q63HM2 1172 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 HHIPL2Q6UWX4 724 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 ZC3H18Q86VM9 953 aaKnown RBP8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 SHC3Q92529 594 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 AZIN2Q96A70 460 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 CLMNQ96JQ2 1002 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 FAM81BQ96LP2 452 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 CORO1BQ9BR76 489 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 TBC1D10AQ9BXI6 508 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 FHDC1Q9C0D6 1143 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 KCNH7Q9NS40 1196 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 RAB20Q9NX57 234 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 NEU2Q9Y3R4 380 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 COMMD3-BMI1R4GMX3 469 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 ARFGEF1Q9Y6D6 1849 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 MYH11P35749 1972 aa8.69□□□□□ -1.02
CDC42SE1-201ENST00000357235 A0A1W2PPM1 405 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 HNRNPDLO14979 420 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 ATP9AO75110 1047 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 TJP3O95049 919 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 TNNI1P19237 187 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 RARRES1P49788 294 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 ARSEP51690 589 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 DYNLT1P63172 113 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 MKRN3Q13064 507 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 PTK6Q13882 451 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 MAP7Q14244 749 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 NFIL3Q16649 462 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 TMEM63BQ5T3F8 832 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 SYCP2LQ5T4T6 812 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 SPOPLQ6IQ16 392 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 RHBDF2Q6PJF5 856 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 FAM13CQ8NE31 585 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 SUPT20HQ8NEM7 779 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 ABTB1Q969K4 478 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 GMCL1Q96IK5 515 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 AGAP3Q96P47 875 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 FAM213AQ9BRX8 229 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 SPATA16Q9BXB7 569 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 OSBPL8Q9BZF1 889 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 MIS12Q9H081 205 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 C10orf88Q9H8K7 445 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 METTL5Q9NRN9 209 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 PRKAG3Q9UGI9 489 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 UBE4BO95155 1302 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 DENND3A2RUS2 1198 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 CFAP69A5D8W1 941 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 ITGB5P18084 799 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 KRT4P19013 534 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 YY1P25490 414 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 YWHABP31946 246 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 SKIV2L2P42285 1042 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 TAS2R40P59535 323 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 ZBTB16Q05516 673 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 LSAMPQ13449 338 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 STAT4Q14765 748 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 SV2AQ7L0J3 742 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 MTDHQ86UE4 582 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 SLC9A9Q8IVB4 645 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 DTX3LQ8TDB6 740 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 NCSTNQ92542 709 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 ZNF333Q96JL9 665 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 AGBL1Q96MI9 1066 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 BRD8Q9H0E9 1235 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 EHMT1Q9H9B1 1298 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 KIAA1586Q9HCI6 787 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 C1orf112Q9NSG2 853 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 STOML1Q9UBI4 398 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 LNPEPQ9UIQ6 1025 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 ZFP69BQ9UJL9 534 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 SCAF8Q9UPN6 1271 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 TMEM98Q9Y2Y6 226 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 SH3GLB1Q9Y371 365 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 MROH7Q68CQ1 1323 aa8.68□□□□□ -1.02
CDC42SE1-201ENST00000357235 P4HBP07237 508 aaKnown RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 CFHP08603 1231 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 GM2AP17900 193 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 EIF2AK2P19525 551 aaKnown RBP8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 FUT4P22083 530 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 MAN1A1P33908 653 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 VHLP40337 213 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 CCNFP41002 786 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 RNF43Q68DV7 783 aa8.67□□□□□ -1.02
CDC42SE1-201ENST00000357235 LVRNQ6Q4G3 990 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms