RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 NIF3L1Q9GZT8 377 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 ZBTB12Q9Y330 459 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 PCDHGC5Q9Y5F6 944 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 DEPDC5O75140 1603 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 PCYT1AP49585 367 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 INPP5AQ14642 412 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 CCNG2Q16589 344 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 C11orf63Q6NUN7 778 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 YTHDF3Q7Z739 585 aaKnown RBP16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 DDIASQ8IXT1 998 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 ZNF507Q8TCN5 953 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 SLC20A1Q8WUM9 679 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 PNMA5Q96PV4 448 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 SIK2Q9H0K1 926 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 PPME1Q9Y570 386 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 EXTL3O43909 919 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 ENTPD3O75355 529 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 ZNF189O75820 626 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 ZCCHC18P0CG32 403 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 MYBL2P10244 700 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 COL9A3Q14050 684 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 TBCCQ15814 346 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 WDR59Q6PJI9 974 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 SETD3Q86TU7 594 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 ATXN2LQ8WWM7 1075 aaKnown RBP16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 ANKRD27Q96NW4 1050 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 PKD2L2Q9NZM6 624 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 TBX20Q9UMR3 447 aa16.32■□□□□ 0.2
TRAPPC11-202ENST00000357207 GRAP2O75791 330 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 ATXN3P54252 364 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 USP10Q14694 798 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 NT5DC3Q86UY8 548 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 ACSF2Q96CM8 615 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 TARS2Q9BW92 718 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 RIOX1Q9H6W3 641 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 EML4Q9HC35 981 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 C15orf41Q9Y2V0 281 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 AKAP10O43572 662 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 LCP1P13796 627 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 TRADDQ15628 312 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 STRIP1Q5VSL9 837 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 ZNF720Q7Z2F6 126 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 SHCBP1LQ9BZQ2 653 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 C20orf96Q9NUD7 363 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 SLC24A2Q9UI40 661 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 SIK3Q9Y2K2 1263 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 C3orf70A6NLC5 250 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 E7ENQ6 273 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 DDX3XO00571 662 aaKnown RBP eCLIP16.31■□□□□ 0.24e-6■■■□□ 16.3
TRAPPC11-202ENST00000357207 ANGPT2O15123 496 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 MYL2P10916 166 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 DSG1Q02413 1049 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 PRR5LQ6MZQ0 368 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 TASP1Q9H6P5 420 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 NDUFA13Q9P0J0 144 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 ARHGAP26Q9UNA1 814 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 ATP6V1B1P15313 513 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 CALB2P22676 271 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 RPL21P46778 160 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 SLC10A5Q5PT55 438 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 DPY19L2Q6NUT2 758 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 FRA10AC1Q70Z53 315 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 SEPT12Q8IYM1 358 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 FBXO36Q8NEA4 188 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 IFT43Q96FT9 208 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 VPS33BQ9H267 617 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 OLFML3Q9NRN5 406 aa16.31■□□□□ 0.2
TRAPPC11-202ENST00000357207 POLBP06746 335 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 ARPP19P56211 112 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 RBP5P82980 135 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 EMC2Q15006 297 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 CCT7Q99832 543 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 RPAP3Q9H6T3 665 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 MRGBPQ9NV56 204 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 SNX9Q9Y5X1 595 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 TECPR2O15040 1411 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 PROSCO94903 275 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 XPAP23025 273 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 BTKQ06187 659 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 CUL2Q13617 745 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 TWF2Q6IBS0 349 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 SCUBE1Q8IWY4 988 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 CD302Q8IX05 232 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 SLC35C1Q96A29 364 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 ULK4Q96C45 1275 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 C17orf75Q9HAS0 396 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 BLOC1S4Q9NUP1 217 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 AP3B1O00203 1094 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 TCN1P20061 433 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 MAP4P27816 1152 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 SREBF1P36956 1147 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 PRKCEQ02156 737 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 CAPRIN1Q14444 709 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 C4orf22Q6V702 233 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 LPAR1Q92633 364 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 SLC5A5Q92911 643 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 TNIP3Q96KP6 325 aa16.3■□□□□ 0.2
TRAPPC11-202ENST00000357207 BRD2P25440 801 aaKnown RBP16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 ITPK1Q13572 414 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 MXD4Q14582 209 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms