RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 HIDE1A8MVS5 230 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 GABRDO14764 452 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 ADH1AP07327 375 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 WARSP23381 471 aaKnown RBP16.63■□□□□ 0.25
TRIM13-201ENST00000356017 PON1P27169 355 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 PCSK1P29120 753 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 ASPAP45381 313 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 NDUFV1P49821 464 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 FANCCQ00597 558 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 UBXN1Q04323 297 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 ADGRE1Q14246 886 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 CDCA3Q99618 268 aaPredicted RBP16.63■□□□□ 0.25
TRIM13-201ENST00000356017 DNAI2Q9GZS0 605 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 RTN4Q9NQC3 1192 aaKnown RBP16.63■□□□□ 0.25
TRIM13-201ENST00000356017 POLIQ9UNA4 740 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 TBC1D4O60343 1298 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 C1RP00736 705 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 CNPP09543 421 aaKnown RBP16.63■□□□□ 0.25
TRIM13-201ENST00000356017 TRIM21P19474 475 aaKnown RBP16.63■□□□□ 0.25
TRIM13-201ENST00000356017 SLC9A1P19634 815 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 GNL1P36915 607 aaPredicted RBP16.63■□□□□ 0.25
TRIM13-201ENST00000356017 YWHAEP62258 255 aaKnown RBP16.63■□□□□ 0.25
TRIM13-201ENST00000356017 GCNT1Q02742 428 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 LRMPQ12912 555 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 CUL2Q13617 745 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 SLC8B1Q6J4K2 584 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 SCARA5Q6ZMJ2 495 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 ENOSF1Q7L5Y1 443 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 PPFIBP1Q86W92 1011 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 PPM1KQ8N3J5 372 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 OR6B3Q8NGW1 331 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 KBTBD7Q8WVZ9 684 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 TATDN2Q93075 761 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 JAKMIP2Q96AA8 810 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 ELMO3Q96BJ8 720 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 KLHL5Q96PQ7 755 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 CLSTN3Q9BQT9 956 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 ACBD6Q9BR61 282 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 SMYD3Q9H7B4 428 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 TLE6Q9H808 572 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 DDX43Q9NXZ2 648 aaKnown RBP16.63■□□□□ 0.25
TRIM13-201ENST00000356017 FBXL5Q9UKA1 691 aa16.63■□□□□ 0.25
TRIM13-201ENST00000356017 A0A1B0GTH6 734 aa16.62■□□□□ 0.25
TRIM13-201ENST00000356017 TEX28O15482 410 aa16.62■□□□□ 0.25
TRIM13-201ENST00000356017 TPM3P06753 285 aa16.62■□□□□ 0.25
TRIM13-201ENST00000356017 KLRC2P26717 231 aa16.62■□□□□ 0.25
TRIM13-201ENST00000356017 OR1D2P34982 312 aa16.62■□□□□ 0.25
TRIM13-201ENST00000356017 UBASH3AP57075 661 aa16.62■□□□□ 0.25
TRIM13-201ENST00000356017 UNC93AQ86WB7 457 aa16.62■□□□□ 0.25
TRIM13-201ENST00000356017 GUCD1Q96NT3 240 aa16.62■□□□□ 0.25
TRIM13-201ENST00000356017 ERGIC2Q96RQ1 377 aa16.62■□□□□ 0.25
TRIM13-201ENST00000356017 APEX2Q9UBZ4 518 aa16.62■□□□□ 0.25
TRIM13-201ENST00000356017 STXBP5LQ9Y2K9 1186 aa16.62■□□□□ 0.25
TRIM13-201ENST00000356017 PCDHGC5Q9Y5F6 944 aa16.62■□□□□ 0.25
TRIM13-201ENST00000356017 CDY1Q9Y6F8 540 aa16.62■□□□□ 0.25
TRIM13-201ENST00000356017 A8MXQ7 604 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 WEE2P0C1S8 567 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 RFX1P22670 979 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 MFAP3P55082 362 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 CDH8P55286 799 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 TSPY1Q01534 308 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 KCNMA1Q12791 1236 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 SMARCB1Q12824 385 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 RAB33AQ14088 237 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 SMYD5Q6GMV2 418 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 PHLDB3Q6NSJ2 640 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 GAS2L3Q86XJ1 694 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 MYLIPQ8WY64 445 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 MRPL45Q9BRJ2 306 aaKnown RBP16.61■□□□□ 0.25
TRIM13-201ENST00000356017 RBSNQ9H1K0 784 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 PLCB1Q9NQ66 1216 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 CDH9Q9ULB4 789 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 BARX2Q9UMQ3 279 aaPredicted RBP16.61■□□□□ 0.25
TRIM13-201ENST00000356017 DAAM1Q9Y4D1 1078 aa16.61■□□□□ 0.25
TRIM13-201ENST00000356017 COL4A4P53420 1690 aaPredicted RBP16.6■□□□□ 0.25
TRIM13-201ENST00000356017 NCK2O43639 380 aa16.6■□□□□ 0.25
TRIM13-201ENST00000356017 FOSL2P15408 326 aa16.6■□□□□ 0.25
TRIM13-201ENST00000356017 RPL17P18621 184 aaKnown RBP16.6■□□□□ 0.25
TRIM13-201ENST00000356017 INCA1Q0VD86 236 aa16.6■□□□□ 0.25
TRIM13-201ENST00000356017 NR1I3Q14994 352 aa16.6■□□□□ 0.25
TRIM13-201ENST00000356017 DUSP6Q16828 381 aa16.6■□□□□ 0.25
TRIM13-201ENST00000356017 RBM23Q86U06 439 aaKnown RBP16.6■□□□□ 0.25
TRIM13-201ENST00000356017 DCP1BQ8IZD4 617 aaKnown RBP16.6■□□□□ 0.25
TRIM13-201ENST00000356017 ZNF461Q8TAF7 563 aa16.6■□□□□ 0.25
TRIM13-201ENST00000356017 TNIP3Q96KP6 325 aa16.6■□□□□ 0.25
TRIM13-201ENST00000356017 PCMTD1Q96MG8 357 aaPredicted RBP16.6■□□□□ 0.25
TRIM13-201ENST00000356017 NAP1L5Q96NT1 182 aaPredicted RBP16.6■□□□□ 0.25
TRIM13-201ENST00000356017 UBE2TQ9NPD8 197 aaPredicted RBP16.6■□□□□ 0.25
TRIM13-201ENST00000356017 DPP7Q9UHL4 492 aa16.6■□□□□ 0.25
TRIM13-201ENST00000356017 CDH23Q9H251 3354 aa16.6■□□□□ 0.25
TRIM13-201ENST00000356017 CBFA2T2O43439 604 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 CPB1P15086 417 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 LMO2P25791 158 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 RAP1GAPP47736 663 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 NRIP1P48552 1158 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 GPR17Q13304 367 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 SYCP1Q15431 976 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 MAPRE1Q15691 268 aaKnown RBP16.59■□□□□ 0.25
TRIM13-201ENST00000356017 TCEAL5Q5H9L2 206 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 TPGS2Q68CL5 300 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms