RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 NCOA4Q13772 614 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 LAYNQ6UX15 382 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 RASGRP2Q7LDG7 609 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 KRCC1Q9NPI7 259 aaPredicted RBP15.53■□□□□ 0.08
LMX1B-201ENST00000355497 ARAP3Q8WWN8 1544 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 CCT8L1PA6NM43 557 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 IGF2BP3O00425 579 aaKnown RBP eCLIP15.53■□□□□ 0.08
LMX1B-201ENST00000355497 NAB2Q15742 525 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 METTL16Q86W50 562 aaKnown RBP15.53■□□□□ 0.08
LMX1B-201ENST00000355497 OSBPL8Q9BZF1 889 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 VPS33BQ9H267 617 aa15.53■□□□□ 0.08
LMX1B-201ENST00000355497 RPAP3Q9H6T3 665 aaPredicted RBP15.53■□□□□ 0.08
LMX1B-201ENST00000355497 CPDO75976 1380 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 STRNO43815 780 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 ITGA8P53708 1063 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 FAM182BQ5T319 152 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 RSAD1Q9HA92 442 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 RBM12Q9NTZ6 932 aaKnown RBP15.52■□□□□ 0.08
LMX1B-201ENST00000355497 USP6P35125 1406 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 LOC102724159A0A0B4J2E5 919 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 TADA2AO75478 443 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 IRF1P10914 325 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 LSP1P33241 339 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 PRKCQQ04759 706 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 PWP2Q15269 919 aaKnown RBP15.52■□□□□ 0.08
LMX1B-201ENST00000355497 HIST2H2ACQ16777 129 aaPredicted RBP15.52■□□□□ 0.08
LMX1B-201ENST00000355497 TRIM16LQ309B1 348 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 HIST2H2AA3Q6FI13 130 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 DPF2Q92785 391 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 MTERF3Q96E29 417 aa15.52■□□□□ 0.08
LMX1B-201ENST00000355497 CFAP99D6REC4 459 aa15.52■□□□□ 0.07
LMX1B-201ENST00000355497 RAD51CO43502 376 aa15.52■□□□□ 0.07
LMX1B-201ENST00000355497 RHOBTB1O94844 696 aa15.52■□□□□ 0.07
LMX1B-201ENST00000355497 PSMA4P25789 261 aaKnown RBP15.52■□□□□ 0.07
LMX1B-201ENST00000355497 MZF1P28698 734 aaPredicted RBP15.52■□□□□ 0.07
LMX1B-201ENST00000355497 SOX6P35712 828 aa15.52■□□□□ 0.07
LMX1B-201ENST00000355497 ACADSBP45954 432 aa15.52■□□□□ 0.07
LMX1B-201ENST00000355497 LDHDQ86WU2 507 aa15.52■□□□□ 0.07
LMX1B-201ENST00000355497 IPMKQ8NFU5 416 aa15.52■□□□□ 0.07
LMX1B-201ENST00000355497 CPSF1Q10570 1443 aaKnown RBP15.52■□□□□ 0.07
LMX1B-201ENST00000355497 C4BPBP20851 252 aa15.52■□□□□ 0.07
LMX1B-201ENST00000355497 ADAMTS12P58397 1594 aa15.52■□□□□ 0.07
LMX1B-201ENST00000355497 POU4F1Q01851 419 aa15.52■□□□□ 0.07
LMX1B-201ENST00000355497 ECSITQ9BQ95 431 aa15.52■□□□□ 0.07
LMX1B-201ENST00000355497 CAAP1Q9H8G2 361 aa15.52■□□□□ 0.07
LMX1B-201ENST00000355497 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.52■□□□□ 0.07
LMX1B-201ENST00000355497 SLC26A4O43511 780 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 NUP62P37198 522 aaPredicted RBP15.51■□□□□ 0.07
LMX1B-201ENST00000355497 ACOT2P49753 483 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 COPAP53621 1224 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 SLC16A1P53985 500 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 KBTBD12Q3ZCT8 623 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 KRT78Q8N1N4 520 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 CHP1Q99653 195 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 PDP2Q9P2J9 529 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 EIF3DO15371 548 aaKnown RBP eCLIP15.51■□□□□ 0.07
LMX1B-201ENST00000355497 DGAT1O75907 488 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 UCHL3P15374 230 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 GEMIN4P57678 1058 aaKnown RBP15.51■□□□□ 0.07
LMX1B-201ENST00000355497 ZRANB3Q5FWF4 1079 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 STKLD1Q8NE28 680 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 C7orf25Q9BPX7 421 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 IMPAD1Q9NX62 359 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 DNAJC5BQ9UF47 199 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 TMEM94Q12767 1356 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 HEATR9A2RTY3 570 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 MAP3K13O43283 966 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 RPS6KA4O75676 772 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 ACADSP16219 412 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 SNRNP35Q16560 246 aaKnown RBP15.51■□□□□ 0.07
LMX1B-201ENST00000355497 PPIL6Q8IXY8 311 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 DDHD1Q8NEL9 900 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 OTUD5Q96G74 571 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 DLGAP2Q9P1A6 1054 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 SOX13Q9UN79 622 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 ADGBQ8N7X0 1667 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 RSPH10B2B2RC85 870 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 EIF2S1P05198 315 aaKnown RBP15.51■□□□□ 0.07
LMX1B-201ENST00000355497 RSPH10BP0C881 870 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 GPD1P21695 349 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 KRR1Q13601 381 aaKnown RBP15.51■□□□□ 0.07
LMX1B-201ENST00000355497 SLC7A14Q8TBB6 771 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 KLF6Q99612 283 aaPredicted RBP15.51■□□□□ 0.07
LMX1B-201ENST00000355497 SYBUQ9NX95 663 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 F8W810 466 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 IL18RAPO95256 599 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 TXNP10599 105 aaKnown RBP15.51■□□□□ 0.07
LMX1B-201ENST00000355497 TWF1Q12792 350 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.51■□□□□ 0.07
LMX1B-201ENST00000355497 TRAPPC11Q7Z392 1133 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 GPR141Q7Z602 305 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 HS6ST3Q8IZP7 471 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 SPATA18Q8TC71 538 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 TRIM9Q9C026 710 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 GOLPH3Q9H4A6 298 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 CXorf56Q9H5V9 222 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 SLC40A1Q9NP59 571 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 EIF3LQ9Y262 564 aaKnown RBP15.51■□□□□ 0.07
LMX1B-201ENST00000355497 NLRP1Q9C000 1473 aa15.51■□□□□ 0.07
LMX1B-201ENST00000355497 ERBB3P21860 1342 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms