RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 KIFC3Q9BVG8 833 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 XPNPEP3Q9NQH7 507 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 ASNSD1Q9NWL6 643 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 RARGP13631 454 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 VGLL4Q14135 290 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 Q4G0T1 1027 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 MOXD1Q6UVY6 613 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 SUGP1Q8IWZ8 645 aaKnown RBP12.95□□□□□ -0.34
COLCA1-201ENST00000355430 DNERQ8NFT8 737 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 MCEEQ96PE7 176 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 COLEC11Q9BWP8 271 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 PRMT7Q9NVM4 692 aaPredicted RBP12.95□□□□□ -0.34
COLCA1-201ENST00000355430 PSMC3IPQ9P2W1 217 aaPredicted RBP12.95□□□□□ -0.34
COLCA1-201ENST00000355430 GTF3C4Q9UKN8 822 aa12.95□□□□□ -0.34
COLCA1-201ENST00000355430 KRT38O76015 456 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 CYBBP04839 570 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 SREBF1P36956 1147 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 OAZ1P54368 228 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 NOP14P78316 857 aaKnown RBP12.94□□□□□ -0.34
COLCA1-201ENST00000355430 DNAJC3Q13217 504 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 MTM1Q13496 603 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 GRAMD1BQ3KR37 738 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 ACAD10Q6JQN1 1059 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 SLC30A10Q6XR72 485 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 DTX3LQ8TDB6 740 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 KLF6Q99612 283 aaPredicted RBP12.94□□□□□ -0.34
COLCA1-201ENST00000355430 MRIQ9BWK5 157 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 DPP7Q9UHL4 492 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 TRAF3IP3Q9Y228 551 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 CFLARO15519 480 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 CD4P01730 458 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 TMEM62Q0P6H9 643 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 ITGB3BPQ13352 177 aaPredicted RBP12.94□□□□□ -0.34
COLCA1-201ENST00000355430 SNX17Q15036 470 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 C2CD6Q53TS8 623 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 NOTUMQ6P988 496 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 WDR75Q8IWA0 830 aaKnown RBP12.94□□□□□ -0.34
COLCA1-201ENST00000355430 LSM7Q9UK45 103 aaKnown RBP12.94□□□□□ -0.34
COLCA1-201ENST00000355430 A8MXQ7 604 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 FSBPO95073 299 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 ZWINTO95229 277 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 TARSP26639 723 aaKnown RBP12.94□□□□□ -0.34
COLCA1-201ENST00000355430 SH3BGRP55822 239 aaPredicted RBP12.94□□□□□ -0.34
COLCA1-201ENST00000355430 CENPCQ03188 943 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 SMAD1Q15797 465 aaKnown RBP12.94□□□□□ -0.34
COLCA1-201ENST00000355430 DBN1Q16643 649 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 DUOXA2Q1HG44 320 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 RGS9BPQ6ZS82 235 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 PTF1AQ7RTS3 328 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 VCX3AQ9NNX9 186 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 AFG3L2Q9Y4W6 797 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 M0QYV0 167 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 UBOX5O94941 541 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 ATP6V1G2O95670 118 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 IFI35P80217 286 aaPredicted RBP12.94□□□□□ -0.34
COLCA1-201ENST00000355430 TFDP2Q14188 446 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 LVRNQ6Q4G3 990 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 ST13P4Q8IZP2 240 aaPredicted RBP12.94□□□□□ -0.34
COLCA1-201ENST00000355430 RBBP8NLQ8NC74 664 aaPredicted RBP12.94□□□□□ -0.34
COLCA1-201ENST00000355430 CBWD1Q9BRT8 395 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 FIS1Q9Y3D6 152 aa12.94□□□□□ -0.34
COLCA1-201ENST00000355430 RPL21P46778 160 aaKnown RBP12.93□□□□□ -0.34
COLCA1-201ENST00000355430 C15orf52Q6ZUT6 534 aaKnown RBP12.93□□□□□ -0.34
COLCA1-201ENST00000355430 NUDCD3Q8IVD9 361 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 DCP1BQ8IZD4 617 aaKnown RBP12.93□□□□□ -0.34
COLCA1-201ENST00000355430 PARD3BQ8TEW8 1205 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 SKA2Q8WVK7 121 aaPredicted RBP12.93□□□□□ -0.34
COLCA1-201ENST00000355430 TSSK1BQ9BXA7 367 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 APOBEC2Q9Y235 224 aaKnown RBP12.93□□□□□ -0.34
COLCA1-201ENST00000355430 PQBP1O60828 265 aaKnown RBP12.93□□□□□ -0.34
COLCA1-201ENST00000355430 OR1G1P47890 313 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 SLC12A3P55017 1021 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 EIF3EP60228 445 aaKnown RBP12.93□□□□□ -0.34
COLCA1-201ENST00000355430 TRADDQ15628 312 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 CD302Q8IX05 232 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 NLGN2Q8NFZ4 835 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 ABHD16BQ9H3Z7 469 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 CACYBPQ9HB71 228 aaKnown RBP12.93□□□□□ -0.34
COLCA1-201ENST00000355430 ZNF263O14978 683 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 CABYRO75952 493 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 ARHGAP15Q53QZ3 475 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 SLC47A2Q86VL8 602 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 FBXO16Q8IX29 292 aaPredicted RBP12.93□□□□□ -0.34
COLCA1-201ENST00000355430 SLC35C1Q96A29 364 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 TMEM143Q96AN5 459 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 ARHGEF26Q96DR7 871 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 CENPKQ9BS16 269 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 VTA1Q9NP79 307 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 BATF3Q9NR55 127 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 RASSF10A6NK89 507 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 KIF3CO14782 793 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 HLA-DRAP01903 254 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 ENO1P06733 434 aaKnown RBP12.93□□□□□ -0.34
COLCA1-201ENST00000355430 PGM1P36871 562 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 CASP5P51878 434 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 ZNF720Q7Z2F6 126 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 TEX2Q8IWB9 1127 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 KCTD17Q8N5Z5 321 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 CEP120Q8N960 986 aa12.93□□□□□ -0.34
COLCA1-201ENST00000355430 ARMC2Q8NEN0 867 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms