RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 TOP6BLQ8N6T0 577 aa10.24□□□□□ -0.77
NPHP1-202ENST00000355301 APPL2Q8NEU8 664 aa10.24□□□□□ -0.77
NPHP1-202ENST00000355301 KBTBD7Q8WVZ9 684 aa10.24□□□□□ -0.77
NPHP1-202ENST00000355301 VWCEQ96DN2 955 aa10.24□□□□□ -0.77
NPHP1-202ENST00000355301 ZSWIM1Q9BR11 485 aa10.24□□□□□ -0.77
NPHP1-202ENST00000355301 MRPL45Q9BRJ2 306 aaKnown RBP10.24□□□□□ -0.77
NPHP1-202ENST00000355301 NT5C1AQ9BXI3 368 aa10.24□□□□□ -0.77
NPHP1-202ENST00000355301 ELOVL4Q9GZR5 314 aa10.24□□□□□ -0.77
NPHP1-202ENST00000355301 RNF216Q9NWF9 866 aaPredicted RBP10.24□□□□□ -0.77
NPHP1-202ENST00000355301 SALL4Q9UJQ4 1053 aa10.24□□□□□ -0.77
NPHP1-202ENST00000355301 KIAA1257Q9ULG3 409 aa10.24□□□□□ -0.77
NPHP1-202ENST00000355301 PCDHGC3Q9UN70 934 aa10.24□□□□□ -0.77
NPHP1-202ENST00000355301 PCDHB7Q9Y5E2 793 aa10.24□□□□□ -0.77
NPHP1-202ENST00000355301 A0A0A6YYK5 440 aaPredicted RBP10.23□□□□□ -0.77
NPHP1-202ENST00000355301 MACROD2A1Z1Q3 448 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 TRIM43BA6NCK2 446 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 CASTOR2A6NHX0 329 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 FANCGO15287 622 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 HUS1O60921 280 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 FGFR1P11362 822 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 PAX3P23760 479 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 CENPCQ03188 943 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 DSC1Q08554 894 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 NOMO2Q5JPE7 1267 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 CNKSR3Q6P9H4 555 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 SYT10Q6XYQ8 523 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 DEFB128Q7Z7B8 93 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 DNAAF5Q86Y56 855 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 C3orf58Q8NDZ4 430 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 URGCPQ8TCY9 931 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 RSPH1Q8WYR4 309 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 TFAP2BQ92481 460 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 SECISBP2LQ93073 1101 aaKnown RBP10.23□□□□□ -0.77
NPHP1-202ENST00000355301 TRIM43Q96BQ3 446 aaPredicted RBP10.23□□□□□ -0.77
NPHP1-202ENST00000355301 WDR24Q96S15 920 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 PAAF1Q9BRP4 392 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 CACNG4Q9UBN1 327 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 PUF60Q9UHX1 559 aaKnown RBP10.23□□□□□ -0.77
NPHP1-202ENST00000355301 DNAI1Q9UI46 699 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 L1RE1Q9UN81 338 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 MICAL3Q7RTP6 2002 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 HOXA2O43364 376 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 MED7O43513 233 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 LSM8O95777 96 aaKnown RBP10.23□□□□□ -0.77
NPHP1-202ENST00000355301 CFHP08603 1231 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 VDRP11473 427 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 EN2P19622 333 aaPredicted RBP10.23□□□□□ -0.77
NPHP1-202ENST00000355301 IGFBP6P24592 240 aaPredicted RBP10.23□□□□□ -0.77
NPHP1-202ENST00000355301 BRD2P25440 801 aaKnown RBP10.23□□□□□ -0.77
NPHP1-202ENST00000355301 ITGB8P26012 769 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 NOMO3P69849 1222 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 IKBKEQ14164 716 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 ZNF569Q5MCW4 686 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 ACAD10Q6JQN1 1059 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 PPP1R2P3Q6NXS1 205 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 KIF18AQ8NI77 898 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 CTNNBL1Q8WYA6 563 aaPredicted RBP10.23□□□□□ -0.77
NPHP1-202ENST00000355301 CYFIP2Q96F07 1278 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 ZNF518BQ9C0D4 1074 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 PDCL3Q9H2J4 239 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 TBC1D13Q9NVG8 400 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 PAXBP1Q9Y5B6 917 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 NME7Q9Y5B8 376 aa10.23□□□□□ -0.77
NPHP1-202ENST00000355301 NCANO14594 1321 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 CYB561D2O14569 222 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 B3GAT3O94766 335 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 CD19P15391 556 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 ABCB4P21439 1286 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 WARSP23381 471 aaKnown RBP10.22□□□□□ -0.77
NPHP1-202ENST00000355301 CDH5P33151 784 aaPredicted RBP10.22□□□□□ -0.77
NPHP1-202ENST00000355301 GNL1P36915 607 aaPredicted RBP10.22□□□□□ -0.77
NPHP1-202ENST00000355301 GPC5P78333 572 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 ORC1Q13415 861 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 TCEAL1Q15170 157 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 MFSD5Q6N075 450 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 DCLRE1AQ6PJP8 1040 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 ZNF280BQ86YH2 543 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 NPAS4Q8IUM7 802 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 ADGRF2Q8IZF7 708 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 ABI1Q8IZP0 508 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 SLC35F6Q8N357 371 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 PDCL2Q8N4E4 241 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 TRIM58Q8NG06 486 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 SENP8Q96LD8 212 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 CASD1Q96PB1 797 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 NOX5Q96PH1 765 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 THAP2Q9H0W7 228 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 LHX5Q9H2C1 402 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 LRFN2Q9ULH4 789 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 STXBP5LQ9Y2K9 1186 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 LTBP2Q14767 1821 aa10.22□□□□□ -0.77
NPHP1-202ENST00000355301 A8MXQ7 604 aa10.21□□□□□ -0.77
NPHP1-202ENST00000355301 O00370 1275 aa10.21□□□□□ -0.77
NPHP1-202ENST00000355301 GABRDO14764 452 aa10.21□□□□□ -0.77
NPHP1-202ENST00000355301 B4GALT3O60512 393 aa10.21□□□□□ -0.77
NPHP1-202ENST00000355301 DDHD2O94830 711 aa10.21□□□□□ -0.77
NPHP1-202ENST00000355301 RAG1P15918 1043 aa10.21□□□□□ -0.77
NPHP1-202ENST00000355301 NSFP46459 744 aaKnown RBP10.21□□□□□ -0.77
NPHP1-202ENST00000355301 STILQ15468 1287 aa10.21□□□□□ -0.77
NPHP1-202ENST00000355301 CNGA2Q16280 664 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms