RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 KLRC2P26717 231 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 KCNJ2P63252 427 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 DCAF15Q66K64 600 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 ANKMY2Q8IV38 441 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 C4orf33Q8N1A6 199 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 LRRC71Q8N4P6 559 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 ZWILCHQ9H900 591 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 NXF1Q9UBU9 619 aaKnown RBP20.68■□□□□ 0.9
COL13A1-201ENST00000354547 SGK1O00141 431 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 LIASO43766 372 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 TBXAS1P24557 533 aaPredicted RBP20.68■□□□□ 0.9
COL13A1-201ENST00000354547 SPATA21Q7Z572 469 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 CKAP2Q8WWK9 683 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 ECT2Q9H8V3 914 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 SLC12A4Q9UP95 1085 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 TRIM33Q9UPN9 1127 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 MAFBQ9Y5Q3 323 aaPredicted RBP20.68■□□□□ 0.9
COL13A1-201ENST00000354547 LDHAP00338 332 aaKnown RBP20.67■□□□□ 0.9
COL13A1-201ENST00000354547 KRT15P19012 456 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 MMP8P22894 467 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 ARL2P36404 184 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 C1QBPQ07021 282 aaKnown RBP20.67■□□□□ 0.9
COL13A1-201ENST00000354547 TMEM132AQ24JP5 1023 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.67■□□□□ 0.9
COL13A1-201ENST00000354547 THNSL1Q8IYQ7 743 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 ZBED8Q8IZ13 594 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 SPOCK2Q92563 424 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 ZBTB10Q96DT7 871 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 TJP2Q9UDY2 1190 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 STYXL1Q9Y6J8 313 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 CD19P15391 556 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 ZNF280AP59817 542 aaPredicted RBP20.67■□□□□ 0.9
COL13A1-201ENST00000354547 TGFB2P61812 414 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 TMEM63BQ5T3F8 832 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 TRIM50Q86XT4 487 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 STK38LQ9Y2H1 464 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 TMEM191CA6NGB0 347 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 TMEM191BP0C7N4 346 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 RMDN2Q96LZ7 410 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 CISHQ9NSE2 258 aa20.67■□□□□ 0.9
COL13A1-201ENST00000354547 SPDYE16A6NNV3 312 aaPredicted RBP20.66■□□□□ 0.9
COL13A1-201ENST00000354547 TJP3O95049 919 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 ZBTB7AO95365 584 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 GJB1P08034 283 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 FOXN2P32314 431 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 HIRAP54198 1017 aaPredicted RBP20.66■□□□□ 0.9
COL13A1-201ENST00000354547 GAD2Q05329 585 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 TRPC3Q13507 836 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 DALRD3Q5D0E6 543 aaKnown RBP20.66■□□□□ 0.9
COL13A1-201ENST00000354547 RCOR2Q8IZ40 523 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 BBOF1Q8ND07 529 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 TFAP2BQ92481 460 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 SPOCD1Q6ZMY3 1216 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 CATSPERGQ6ZRH7 1159 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 ARHGEF18Q6ZSZ5 1173 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 VCPIP1Q96JH7 1222 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 AGTPBP1Q9UPW5 1226 aa20.66■□□□□ 0.9
COL13A1-201ENST00000354547 KRT19P08727 400 aa20.65■□□□□ 0.9
COL13A1-201ENST00000354547 UBA1P22314 1058 aaKnown RBP20.65■□□□□ 0.9
COL13A1-201ENST00000354547 RAP1GAPP47736 663 aa20.65■□□□□ 0.9
COL13A1-201ENST00000354547 STAT4Q14765 748 aa20.65■□□□□ 0.9
COL13A1-201ENST00000354547 PKN2Q16513 984 aaKnown RBP20.65■□□□□ 0.9
COL13A1-201ENST00000354547 DPH6Q7L8W6 267 aa20.65■□□□□ 0.9
COL13A1-201ENST00000354547 ERICH1Q86X53 443 aa20.65■□□□□ 0.9
COL13A1-201ENST00000354547 ZCCHC9Q8N567 271 aaKnown RBP20.65■□□□□ 0.9
COL13A1-201ENST00000354547 RBM41Q96IZ5 413 aaKnown RBP20.65■□□□□ 0.9
COL13A1-201ENST00000354547 PCYT2Q99447 389 aa20.65■□□□□ 0.9
COL13A1-201ENST00000354547 NFKBIEO00221 500 aa20.65■□□□□ 0.9
COL13A1-201ENST00000354547 STAT5BP51692 787 aa20.65■□□□□ 0.9
COL13A1-201ENST00000354547 DNAJC3Q13217 504 aa20.65■□□□□ 0.9
COL13A1-201ENST00000354547 SYCP2LQ5T4T6 812 aa20.65■□□□□ 0.9
COL13A1-201ENST00000354547 CCDC91Q7Z6B0 441 aa20.65■□□□□ 0.9
COL13A1-201ENST00000354547 FITM2Q8N6M3 262 aa20.65■□□□□ 0.9
COL13A1-201ENST00000354547 PITPNM3Q9BZ71 974 aa20.65■□□□□ 0.9
COL13A1-201ENST00000354547 ARID2Q68CP9 1835 aa20.64■□□□□ 0.9
COL13A1-201ENST00000354547 DNALI1O14645 258 aaPredicted RBP20.64■□□□□ 0.9
COL13A1-201ENST00000354547 ATP6V1G2O95670 118 aa20.64■□□□□ 0.9
COL13A1-201ENST00000354547 PDIA2Q13087 525 aaKnown RBP20.64■□□□□ 0.9
COL13A1-201ENST00000354547 LY6KQ17RY6 165 aa20.64■□□□□ 0.9
COL13A1-201ENST00000354547 CEP120Q8N960 986 aa20.64■□□□□ 0.9
COL13A1-201ENST00000354547 RNF149Q8NC42 400 aa20.64■□□□□ 0.9
COL13A1-201ENST00000354547 NOD2Q9HC29 1040 aa20.64■□□□□ 0.9
COL13A1-201ENST00000354547 ADCY3O60266 1144 aa20.64■□□□□ 0.89
COL13A1-201ENST00000354547 WDR4P57081 412 aaKnown RBP20.64■□□□□ 0.89
COL13A1-201ENST00000354547 CGB2Q6NT52 195 aa20.64■□□□□ 0.89
COL13A1-201ENST00000354547 EMC1Q8N766 993 aa20.64■□□□□ 0.89
COL13A1-201ENST00000354547 TMEM35BQ8NCS4 154 aa20.64■□□□□ 0.89
COL13A1-201ENST00000354547 CFAP57Q96MR6 1250 aa20.64■□□□□ 0.89
COL13A1-201ENST00000354547 IGF2BP3O00425 579 aaKnown RBP eCLIP20.64■□□□□ 0.89
COL13A1-201ENST00000354547 ASS1P00966 412 aaKnown RBP20.64■□□□□ 0.89
COL13A1-201ENST00000354547 NCALDP61601 193 aa20.64■□□□□ 0.89
COL13A1-201ENST00000354547 WDTC1Q8N5D0 677 aa20.64■□□□□ 0.89
COL13A1-201ENST00000354547 ADGRA2Q96PE1 1338 aa20.64■□□□□ 0.89
COL13A1-201ENST00000354547 SLCO1B3Q9NPD5 702 aa20.64■□□□□ 0.89
COL13A1-201ENST00000354547 PCSK1NQ9UHG2 260 aa20.64■□□□□ 0.89
COL13A1-201ENST00000354547 POLIQ9UNA4 740 aa20.64■□□□□ 0.89
COL13A1-201ENST00000354547 ARL2BPQ9Y2Y0 163 aa20.64■□□□□ 0.89
COL13A1-201ENST00000354547 MGRN1O60291 552 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 OAS1P00973 400 aaKnown RBP20.63■□□□□ 0.89
COL13A1-201ENST00000354547 TCF7P36402 384 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms