RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TREHO43280 583 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 MED7O43513 233 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 SPOPO43791 374 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 NPTXRO95502 500 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 MYL3P08590 195 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 KRT19P08727 400 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 GNAT1P11488 350 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 P4HA1P13674 534 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 CD58P19256 250 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 POLR2BP30876 1174 aaKnown RBP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 PTGIRP43119 386 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 RAP1GAPP47736 663 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 CARSP49589 748 aaKnown RBP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 GUCY2FP51841 1108 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 CRYBB1P53674 252 aaPredicted RBP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 DRG2P55039 364 aaKnown RBP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 FCGRTP55899 365 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 ZNF200P98182 395 aaPredicted RBP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 BEX3Q00994 111 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 GUCY2DQ02846 1103 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 TAP1Q03518 808 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 GABPB1Q06547 395 aaPredicted RBP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 CUL1Q13616 776 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 CNGA2Q16280 664 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 WDR72Q3MJ13 1102 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 AADACL2Q6P093 401 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 LLGL2Q6P1M3 1020 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 DENND1BQ6P3S1 775 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 NOTUMQ6P988 496 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 SND1Q7KZF4 910 aaKnown RBP eCLIP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 CATSPER4Q7RTX7 472 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 MAATS1Q7Z4T9 603 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 PASD1Q8IV76 773 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 TTC39CQ8N584 583 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 LRRC52Q8N7C0 313 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 C12orf50Q8NA57 414 aaPredicted RBP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 SLC4A11Q8NBS3 891 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 C1orf131Q8NDD1 294 aaKnown RBP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 CCDC26Q8TAB7 109 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 TMEM40Q8WWA1 233 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 DNAJB3Q8WWF6 145 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 TRIB2Q92519 343 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 HPDLQ96IR7 371 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 ZMAT2Q96NC0 199 aaKnown RBP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 TWNKQ96RR1 684 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 OSMRQ99650 979 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 EIF2AQ9BY44 585 aaKnown RBP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 DDX47Q9H0S4 455 aaKnown RBP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 CXCL16Q9H2A7 254 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 SMYD3Q9H7B4 428 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 ERVK-5Q9HDB9 667 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 PARVAQ9NVD7 372 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 DPP3Q9NY33 737 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 CNTN3Q9P232 1028 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 NXF1Q9UBU9 619 aaKnown RBP7.35□□□□□ -1.23
TRIM55-203ENST00000350034 PCYOX1Q9UHG3 505 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 LCMT1Q9UIC8 334 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 AGAP1Q9UPQ3 857 aa7.35□□□□□ -1.23
TRIM55-203ENST00000350034 GOLGA6L10A0A0M3HER8 536 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 ESYT3A0FGR9 886 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 AGPSO00116 658 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 O00370 1275 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 TLR3O15455 904 aaKnown RBP7.34□□□□□ -1.23
TRIM55-203ENST00000350034 PSTPIP1O43586 416 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 PHF2O75151 1096 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 ECM2O94769 699 aaPredicted RBP7.34□□□□□ -1.23
TRIM55-203ENST00000350034 ALDH1A1P00352 501 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 FAM153BP0C7A2 387 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 RARAP10276 462 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 VDRP11473 427 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 KCNE1P15382 129 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 OAS2P29728 719 aaKnown RBP7.34□□□□□ -1.23
TRIM55-203ENST00000350034 CHRNA3P32297 505 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 SSTR3P32745 418 aaPredicted RBP7.34□□□□□ -1.23
TRIM55-203ENST00000350034 PSMC4P43686 418 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 GABRB2P47870 512 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 CDH8P55286 799 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 TAS2R40P59535 323 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 FAM193AP78312 1265 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 LACTBP83111 547 aaPredicted RBP7.34□□□□□ -1.23
TRIM55-203ENST00000350034 PTPN11Q06124 597 aaPredicted RBP7.34□□□□□ -1.23
TRIM55-203ENST00000350034 ZNF252P-AS1Q0IIN9 211 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 TMEM62Q0P6H9 643 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 DHX34Q14147 1143 aaKnown RBP7.34□□□□□ -1.23
TRIM55-203ENST00000350034 TRADDQ15628 312 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 FAM153CQ494X1 144 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 PTPN20Q4JDL3 420 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 ZNF394Q53GI3 561 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 C2CD6Q53TS8 623 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 SEL1L2Q5TEA6 688 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 LRRC38Q5VT99 294 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 MFSD14CQ5VZR4 134 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 DUPD1Q68J44 220 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 TAF2Q6P1X5 1199 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 SCARA5Q6ZMJ2 495 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 LIMS2Q7Z4I7 341 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 RPAINQ86UA6 219 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 SESTD1Q86VW0 696 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 KATNAL2Q8IYT4 538 aa7.34□□□□□ -1.23
TRIM55-203ENST00000350034 NIPA2Q8N8Q9 360 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms