RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 SRRM3A6NNA2 597 aaPredicted RBP17.12■□□□□ 0.33
COPE-202ENST00000349893 C4orf47A7E2U8 309 aa17.12■□□□□ 0.33
COPE-202ENST00000349893 MCM7P33993 719 aa17.12■□□□□ 0.33
COPE-202ENST00000349893 PEX3P56589 373 aa17.12■□□□□ 0.33
COPE-202ENST00000349893 ORC2Q13416 577 aaPredicted RBP17.12■□□□□ 0.33
COPE-202ENST00000349893 ELF2Q15723 593 aa17.12■□□□□ 0.33
COPE-202ENST00000349893 ZBTB6Q15916 424 aa17.12■□□□□ 0.33
COPE-202ENST00000349893 SH3PXD2AQ5TCZ1 1133 aa17.12■□□□□ 0.33
COPE-202ENST00000349893 DAB2IPQ5VWQ8 1189 aa17.12■□□□□ 0.33
COPE-202ENST00000349893 HAUS3Q68CZ6 603 aa17.12■□□□□ 0.33
COPE-202ENST00000349893 ATAD1Q8NBU5 361 aa17.12■□□□□ 0.33
COPE-202ENST00000349893 PLEKHA5Q9HAU0 1116 aa17.12■□□□□ 0.33
COPE-202ENST00000349893 SLC27A5Q9Y2P5 690 aa17.12■□□□□ 0.33
COPE-202ENST00000349893 RBM19Q9Y4C8 960 aaKnown RBP17.12■□□□□ 0.33
COPE-202ENST00000349893 TIMM13Q9Y5L4 95 aaPredicted RBP17.12■□□□□ 0.33
COPE-202ENST00000349893 NUP205Q92621 2012 aa17.12■□□□□ 0.33
COPE-202ENST00000349893 LAMA5O15230 3695 aa17.12■□□□□ 0.33
COPE-202ENST00000349893 ATG2BQ96BY7 2078 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 CCDC169A6NNP5 214 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 TOM1L1O75674 476 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 RHOBTB1O94844 696 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 LARGE1O95461 756 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 CAVIN2O95810 425 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 OR52Z1P0C646 297 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 TYMPP19971 482 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 CYP3A5P20815 502 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 FOXC1Q12948 553 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 DMP1Q13316 513 aaPredicted RBP17.11■□□□□ 0.33
COPE-202ENST00000349893 RUNX3Q13761 415 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 SYT13Q7L8C5 426 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 TTC9BQ8N6N2 239 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 NTPCRQ9BSD7 190 aaKnown RBP17.11■□□□□ 0.33
COPE-202ENST00000349893 TCHPQ9BT92 498 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 C17orf75Q9HAS0 396 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 GKN1Q9NS71 199 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 KIAA1549LQ6ZVL6 1849 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 DENND4CQ5VZ89 1909 aa17.11■□□□□ 0.33
COPE-202ENST00000349893 TSC2P49815 1807 aa17.1■□□□□ 0.33
COPE-202ENST00000349893 RNF40O75150 1001 aa17.1■□□□□ 0.33
COPE-202ENST00000349893 EGFP01133 1207 aa17.1■□□□□ 0.33
COPE-202ENST00000349893 DRD1P21728 446 aa17.1■□□□□ 0.33
COPE-202ENST00000349893 CDC25CP30307 473 aa17.1■□□□□ 0.33
COPE-202ENST00000349893 MAPK7Q13164 816 aa17.1■□□□□ 0.33
COPE-202ENST00000349893 NOLC1Q14978 699 aaKnown RBP eCLIP17.1■□□□□ 0.33
COPE-202ENST00000349893 FBXO43Q4G163 708 aa17.1■□□□□ 0.33
COPE-202ENST00000349893 USP37Q86T82 979 aa17.1■□□□□ 0.33
COPE-202ENST00000349893 CMTM8Q8IZV2 173 aa17.1■□□□□ 0.33
COPE-202ENST00000349893 ZBTB45Q96K62 511 aaPredicted RBP17.1■□□□□ 0.33
COPE-202ENST00000349893 HHIPQ96QV1 700 aa17.1■□□□□ 0.33
COPE-202ENST00000349893 SLC46A2Q9BY10 475 aa17.1■□□□□ 0.33
COPE-202ENST00000349893 TBX20Q9UMR3 447 aa17.1■□□□□ 0.33
COPE-202ENST00000349893 TTC26A0AVF1 554 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 SOBPA7XYQ1 873 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 CDX4O14627 284 aaPredicted RBP17.09■□□□□ 0.33
COPE-202ENST00000349893 HIP1RO75146 1068 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 SOAT2O75908 522 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 APBB3O95704 486 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 TOP3BO95985 862 aaKnown RBP17.09■□□□□ 0.33
COPE-202ENST00000349893 SPINK2P20155 84 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.332e-7■■□□□ 12.3
COPE-202ENST00000349893 CYP4F8P98187 520 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 CREB5Q02930 508 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 MCL1Q07820 350 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 OVOS1Q6IE37 1185 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 LRSAM1Q6UWE0 723 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 TMEM130Q8N3G9 435 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 DRC1Q96MC2 740 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 SCNM1Q9BWG6 230 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 FBRSL1Q9HCM7 1045 aaKnown RBP17.09■□□□□ 0.33
COPE-202ENST00000349893 KMT5AQ9NQR1 393 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 POLR3BQ9NW08 1133 aaPredicted RBP17.09■□□□□ 0.33
COPE-202ENST00000349893 MYO16Q9Y6X6 1858 aa17.09■□□□□ 0.33
COPE-202ENST00000349893 GCN1Q92616 2671 aaKnown RBP17.08■□□□□ 0.33
COPE-202ENST00000349893 DCLK1O15075 740 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 CXCL8P10145 99 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 ATF6P18850 670 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 CCT6AP40227 531 aaKnown RBP17.08■□□□□ 0.32
COPE-202ENST00000349893 TUFMP49411 452 aaKnown RBP17.08■□□□□ 0.32
COPE-202ENST00000349893 AMPD2Q01433 879 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 PMS2CLQ68D20 193 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 ZPBP2Q6X784 338 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 TMEM150AQ86TG1 271 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 C11orf74Q86VG3 221 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 NSUN7Q8NE18 718 aaKnown RBP17.08■□□□□ 0.32
COPE-202ENST00000349893 LPIN3Q9BQK8 851 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 SMG9Q9H0W8 520 aaKnown RBP17.08■□□□□ 0.32
COPE-202ENST00000349893 EBF3Q9H4W6 596 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 KIF9Q9HAQ2 790 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 TMEM9BQ9NQ34 198 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 UBQLN1Q9UMX0 589 aaKnown RBP17.08■□□□□ 0.32
COPE-202ENST00000349893 KIAA1024Q9UPX6 916 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 SMG1Q96Q15 3661 aaKnown RBP17.08■□□□□ 0.32
COPE-202ENST00000349893 ABCA7Q8IZY2 2146 aa17.08■□□□□ 0.32
COPE-202ENST00000349893 ASCC3Q8N3C0 2202 aaKnown RBP17.07■□□□□ 0.32
COPE-202ENST00000349893 ADRB2P07550 413 aa17.07■□□□□ 0.32
COPE-202ENST00000349893 HARSP12081 509 aaKnown RBP17.07■□□□□ 0.32
COPE-202ENST00000349893 PAX3P23760 479 aa17.07■□□□□ 0.32
COPE-202ENST00000349893 GALK1P51570 392 aa17.07■□□□□ 0.32
COPE-202ENST00000349893 RING1Q06587 406 aa17.07■□□□□ 0.32
COPE-202ENST00000349893 SEZ6Q53EL9 994 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms