RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 NSMCE4AQ9NXX6 385 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 PNMA8BQ9ULN7 279 aaPredicted RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 SYNRGQ9UMZ2 1314 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 UGGT1Q9NYU2 1555 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 ADCY9O60503 1353 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 KLF18A0A0U1RQI7 1052 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 LRRC53A6NM62 1247 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 NEURL1BA8MQ27 555 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 NEMP1O14524 444 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 ZNF263O14978 683 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 PPP6R2O75170 966 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 ATP5BP06576 529 aaKnown RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 NT5C2P49902 561 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 SLC29A2Q14542 456 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 PCBP2Q15366 365 aaKnown RBP eCLIP6.3□□□□□ -1.4
RFC1-201ENST00000349703 CACNA2D4Q7Z3S7 1137 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 FMR1NBQ8N0W7 255 aaPredicted RBP6.3□□□□□ -1.4
RFC1-201ENST00000349703 CCDC140Q96MF4 163 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 ACAP3Q96P50 834 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 CUEDC2Q9H467 287 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 TRIM36Q9NQ86 728 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 USP22Q9UPT9 525 aa6.3□□□□□ -1.4
RFC1-201ENST00000349703 TNPO2O14787 897 aaKnown RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 MCF2LO15068 1137 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 HSPA4LO95757 839 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 GSTP1P09211 210 aaKnown RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 LTBRP36941 435 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 METAP2P50579 478 aaKnown RBP eCLIP6.29□□□□□ -1.4
RFC1-201ENST00000349703 SRSF2Q01130 221 aaKnown RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 KLF1Q13351 362 aaPredicted RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 SH2D4BQ5SQS7 431 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 CPZQ66K79 652 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 CAPRIN2Q6IMN6 1127 aaKnown RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 LMNTD2Q8IXW0 634 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 PPP1R13LQ8WUF5 828 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 AUTS2Q8WXX7 1259 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 FAM227BQ96M60 508 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 FNBP1Q96RU3 617 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 STK33Q9BYT3 514 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 BHMT2Q9H2M3 363 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 GTF2IRD1Q9UHL9 959 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 GPR160Q9UJ42 338 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 SLC9A8Q9Y2E8 581 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 PCDHGA1Q9Y5H4 931 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 ARAP3Q8WWN8 1544 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 RFX7Q2KHR2 1363 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 CDC42BPGQ6DT37 1551 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 UBA6A0AVT1 1052 aaPredicted RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 PI4KAP2A4QPH2 592 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 GCOM1H8Y6P7 765 aaPredicted RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 GPR25O00155 361 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 CEP104O60308 925 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 SOD2P04179 222 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 ZFYP08048 801 aaPredicted RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 KRT19P08727 400 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 MYZAPP0CAP1 466 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 TMPRSS3P57727 454 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 ASPHQ12797 758 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 IKZF1Q13422 519 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 POSTNQ15063 836 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 SLC10A6Q3KNW5 377 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 C4orf46Q504U0 113 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 LRRC73Q5JTD7 316 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 SLC44A2Q8IWA5 706 aaPredicted RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 PI4KAP1Q8N8J0 262 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 RNF217Q8TC41 542 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 DPF2Q92785 391 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 USP44Q9H0E7 712 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 POFUT1Q9H488 388 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 IFT122Q9HBG6 1241 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 PALMDQ9NP74 551 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 SH3GLB2Q9NR46 395 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 CCDC154A6NI56 674 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 PRPF3O43395 683 aaKnown RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 GCATO75600 419 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 SERPINI2O75830 405 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 FLOT1O75955 427 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 FGFR1OPO95684 399 aaKnown RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 GCFC2P16383 781 aaKnown RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 MSX1P28360 303 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 PLCD1P51178 756 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 EPHB4P54760 987 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 CUL1Q13616 776 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 MAPRE1Q15691 268 aaKnown RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 GPR162Q16538 588 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 PLEKHN1Q494U1 663 aaPredicted RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 INO80DQ53TQ3 878 aaPredicted RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 FAM102BQ5T8I3 360 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 CLEC9AQ6UXN8 241 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 LRRC31Q6UY01 552 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 IKBIPQ70UQ0 350 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 LSRQ86X29 649 aaPredicted RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 CHST14Q8NCH0 376 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 LINC00301Q8NCQ3 95 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 NSUN7Q8NE18 718 aaKnown RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 P3H4Q92791 437 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 EMID1Q96A84 441 aaPredicted RBP6.29□□□□□ -1.4
RFC1-201ENST00000349703 CAPZA3Q96KX2 299 aa6.29□□□□□ -1.4
RFC1-201ENST00000349703 ZNF558Q96NG5 402 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms