RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 SHOX2O60902 331 aaPredicted RBP21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 GJB6O95452 261 aa21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 ECEL1O95672 775 aa21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 PAEPP09466 180 aa21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 KCNJ1P48048 391 aa21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 RPL7AP62424 266 aaKnown RBP21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 TAP1Q03518 808 aa21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 DNAJC24Q6P3W2 148 aa21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 LEKR1Q6ZMV7 388 aa21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 ERICH1Q86X53 443 aa21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 FBXO25Q8TCJ0 367 aa21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 PPP1R13LQ8WUF5 828 aa21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 LHX5Q9H2C1 402 aa21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 NMRK2Q9NPI5 230 aa21.59■■□□□ 1.05
CHRNA3-202ENST00000348639 GOLGA6L10A6NI86 522 aa21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 O00370 1275 aa21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 IGF2BP3O00425 579 aaKnown RBP eCLIP21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 RPS6KA5O75582 802 aa21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 RAP1GAPP47736 663 aa21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 LLGL1Q15334 1064 aa21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 EXD1Q8NHP7 514 aa21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 C1orf54Q8WWF1 131 aa21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 ATP6V1G3Q96LB4 118 aa21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 FAM129AQ9BZQ8 928 aa21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 TMBIM4Q9HC24 238 aa21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 SETD4Q9NVD3 440 aa21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 GINS2Q9Y248 185 aa21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 PTPN22Q9Y2R2 807 aa21.58■■□□□ 1.05
CHRNA3-202ENST00000348639 RRN3P2A6NIE6 340 aa21.58■■□□□ 1.04
CHRNA3-202ENST00000348639 HMGB1P1B2RPK0 211 aaPredicted RBP21.58■■□□□ 1.04
CHRNA3-202ENST00000348639 RAD23BP54727 409 aa21.58■■□□□ 1.04
CHRNA3-202ENST00000348639 PPP1R15BQ5SWA1 713 aa21.58■■□□□ 1.04
CHRNA3-202ENST00000348639 KCTD16Q68DU8 428 aa21.58■■□□□ 1.04
CHRNA3-202ENST00000348639 ADPGKQ9BRR6 497 aa21.58■■□□□ 1.04
CHRNA3-202ENST00000348639 HERPUD2Q9BSE4 406 aa21.58■■□□□ 1.04
CHRNA3-202ENST00000348639 SDCBP2Q9H190 292 aa21.58■■□□□ 1.04
CHRNA3-202ENST00000348639 USTQ9Y2C2 406 aa21.58■■□□□ 1.04
CHRNA3-202ENST00000348639 MYZAPP0CAP1 466 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 CDH8P55286 799 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 SKOR1P84550 965 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 ZNF844Q08AG5 666 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 KLF1Q13351 362 aaPredicted RBP21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 TMEM132DQ14C87 1099 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 TAF1CQ15572 869 aaPredicted RBP21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 DENND1BQ6P3S1 775 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 CCDC50Q8IVM0 306 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 TMEM130Q8N3G9 435 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 C3orf20Q8ND61 904 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 ACAP3Q96P50 834 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 CYP3A43Q9HB55 503 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 HOMER3Q9NSC5 361 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 STRIP2Q9ULQ0 834 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 ATP8A1Q9Y2Q0 1164 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 C2CD2Q9Y426 696 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 KAT6AQ92794 2004 aa21.57■■□□□ 1.04
CHRNA3-202ENST00000348639 RALAP11233 206 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 CD19P15391 556 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 ZNF252P-AS1Q0IIN9 211 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 TMEM62Q0P6H9 643 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 MAP2K5Q13163 448 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 EMC10Q5UCC4 262 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 DCUN1D2Q6PH85 259 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 SYDE1Q6ZW31 735 aaPredicted RBP21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 NT5DC4Q86YG4 428 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 SH2D3CQ8N5H7 860 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 OR2W6PQ8NHA6 318 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 PKNOX2Q96KN3 472 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 MCEEQ96PE7 176 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 DCLK3Q9C098 648 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 CHST7Q9NS84 486 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 MTRF1LQ9UGC7 380 aaKnown RBP21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 ZNF236Q9UL36 1845 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 P4HA1P13674 534 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 FGFR4P22455 802 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 SSR1P43307 286 aaKnown RBP21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 IRF5Q13568 498 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 PPP1R7Q15435 360 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 ZSCAN26Q16670 478 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 KIZQ2M2Z5 673 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 MORN1Q5T089 497 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 LRRC38Q5VT99 294 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 RUFY4Q6ZNE9 571 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 RASAL3Q86YV0 1011 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 ART4Q93070 314 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 LENG1Q96BZ8 264 aaPredicted RBP21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 OSBPL8Q9BZF1 889 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 FAM49AQ9H0Q0 323 aaPredicted RBP21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 SMYD3Q9H7B4 428 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 FLRT1Q9NZU1 646 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 FEZ2Q9UHY8 353 aaPredicted RBP21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 ITGA11Q9UKX5 1188 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 DOCK3Q8IZD9 2030 aa21.56■■□□□ 1.04
CHRNA3-202ENST00000348639 A6NJR5 290 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 CILPO75339 1184 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 ITGBL1O95965 494 aaPredicted RBP21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 POLR2BP30876 1174 aaKnown RBP21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 SNX1Q13596 522 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 PIGHQ14442 188 aaPredicted RBP21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 SLC4A11Q8NBS3 891 aa21.55■■□□□ 1.04
CHRNA3-202ENST00000348639 GRK7Q8WTQ7 553 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms