RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 GALNT4Q8N4A0 578 aa11.6□□□□□ -0.55
SMARCE1-202ENST00000348513 SCG3Q8WXD2 468 aaKnown RBP11.6□□□□□ -0.55
SMARCE1-202ENST00000348513 PIN4Q9Y237 131 aaKnown RBP11.6□□□□□ -0.55
SMARCE1-202ENST00000348513 CDC42BPBQ9Y5S2 1711 aa11.6□□□□□ -0.55
SMARCE1-202ENST00000348513 PVALEFA0A1B0GWK0 134 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 NEMP1O14524 444 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 TEX28O15482 410 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 BLMHQ13867 455 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 ANGPT1Q15389 498 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 TRIP10Q15642 601 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 SLC10A5Q5PT55 438 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 DQX1Q8TE96 717 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 KLHL4Q9C0H6 718 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 TRIM45Q9H8W5 580 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 PIDD1Q9HB75 910 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 PCDHA10Q9Y5I2 948 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 M0R3G1 203 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 KRT16P08779 473 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 C4BPBP20851 252 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 ATP6V1C1P21283 382 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 EIF2B5Q13144 721 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 ANO4Q32M45 955 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 PPP4R4Q6NUP7 873 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 PNKPQ96T60 521 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 PRPF18Q99633 342 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 FAM8A1Q9UBU6 413 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 CCDC195A0A1B0GUA6 201 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 C16orf96A6NNT2 1141 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 RASSF9O75901 435 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 SDC4P31431 198 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 GALK1P51570 392 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 KPNA2P52292 529 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 MARK2Q7KZI7 788 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 FASTKD5Q7L8L6 764 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 HAUS6Q7Z4H7 955 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 KDELC2Q7Z4H8 507 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 SCUBE1Q8IWY4 988 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 AGAP11Q8TF27 550 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 MTMR4Q9NYA4 1195 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 ZNF70Q9UC06 446 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 RBMX2Q9Y388 322 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 GPC6Q9Y625 555 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 CEP152O94986 1710 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 PNPLA7Q6ZV29 1317 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 IQANK1A0A1B0GTG1 560 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 SMIM31A0A1B0GVY4 71 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 O00370 1275 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 CALB1P05937 261 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 ENO2P09104 434 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 KITP10721 976 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 HOXD10P28358 340 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 BYSLQ13895 437 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 LRRC14Q15048 493 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 DCAF4L1Q3SXM0 396 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 SYCP2LQ5T4T6 812 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 C6orf183Q5T699 404 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 FAM102AQ5T9C2 384 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 NEK10Q6ZWH5 1172 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 STK32AQ8WU08 396 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 HPS1Q92902 700 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 ERP27Q96DN0 273 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 KLHL11Q9NVR0 708 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 EVPLLA8MZ36 301 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 KLHL41O60662 606 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 TPPPO94811 219 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 STAT5BP51692 787 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 RABGAP1LQ5R372 815 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 PRR23CQ6ZRP0 262 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 SZRD1Q7Z422 152 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 TOR1AIP2Q8NFQ8 470 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 SPON1Q9HCB6 807 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 MRPL39Q9NYK5 338 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 GGA3Q9NZ52 723 aa11.59□□□□□ -0.55
SMARCE1-202ENST00000348513 ADGRA3Q8IWK6 1321 aa11.58□□□□□ -0.55
SMARCE1-202ENST00000348513 SEC24DO94855 1032 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 NDUFB10O96000 172 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 ALOX5P09917 674 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 ZNF24P17028 368 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 CYP11B2P19099 503 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 CHKAP35790 457 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 ZNF157P51786 506 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 CASP5P51878 434 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 OCRLQ01968 901 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 STRIP1Q5VSL9 837 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 KRT39Q6A163 491 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 WDR93Q6P2C0 686 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 TMEM53Q6P2H8 277 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 SPON2Q9BUD6 331 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 DTNAQ9Y4J8 743 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 JCADQ9P266 1359 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 DYNC1LI2O43237 492 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 GRIK3Q13003 919 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 ITPK1Q13572 414 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 SKIV2LQ15477 1246 aaKnown RBP11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 TAF1CQ15572 869 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 KIF19Q2TAC6 998 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 CRLF3Q8IUI8 442 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 GLYCTKQ8IVS8 523 aa11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 MMTAG2Q9BU76 263 aaKnown RBP11.58□□□□□ -0.56
SMARCE1-202ENST00000348513 EDEM3Q9BZQ6 932 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms