RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 MBTD1Q05BQ5 628 aa22.6■■□□□ 1.21
PTPN18-202ENST00000347849 MCL1Q07820 350 aa22.6■■□□□ 1.21
PTPN18-202ENST00000347849 LAMC2Q13753 1193 aa22.6■■□□□ 1.21
PTPN18-202ENST00000347849 TTC27Q6P3X3 843 aa22.6■■□□□ 1.21
PTPN18-202ENST00000347849 CPA5Q8WXQ8 436 aa22.6■■□□□ 1.21
PTPN18-202ENST00000347849 ZNF653Q96CK0 615 aa22.6■■□□□ 1.21
PTPN18-202ENST00000347849 FZD8Q9H461 694 aa22.6■■□□□ 1.21
PTPN18-202ENST00000347849 IFT122Q9HBG6 1241 aa22.6■■□□□ 1.21
PTPN18-202ENST00000347849 MTRF1LQ9UGC7 380 aaKnown RBP22.6■■□□□ 1.21
PTPN18-202ENST00000347849 CPSF3Q9UKF6 684 aaKnown RBP22.6■■□□□ 1.21
PTPN18-202ENST00000347849 PLXNB2O15031 1838 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 GAS2O43903 313 aaKnown RBP22.59■■□□□ 1.21
PTPN18-202ENST00000347849 CHRNA3P32297 505 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 TMEM270Q6UE05 265 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 ENOSF1Q7L5Y1 443 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 DPP9Q86TI2 863 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 GTF3C2Q8WUA4 911 aaPredicted RBP22.59■■□□□ 1.21
PTPN18-202ENST00000347849 C16orf70Q9BSU1 422 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 NUP85Q9BW27 656 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 SLC45A1Q9Y2W3 748 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 CEP83Q9Y592 693 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 OGTO15294 1046 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 GH1P01241 217 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 PROZP22891 400 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 HADHBP55084 474 aaKnown RBP22.59■■□□□ 1.21
PTPN18-202ENST00000347849 CLEC16AQ2KHT3 1053 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 ACAD10Q6JQN1 1059 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 CCDC137Q6PK04 289 aaKnown RBP22.59■■□□□ 1.21
PTPN18-202ENST00000347849 TRIM7Q9C029 511 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 VTA1Q9NP79 307 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 PTPN22Q9Y2R2 807 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 EVPLQ92817 2033 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 PLXNA1Q9UIW2 1896 aa22.59■■□□□ 1.21
PTPN18-202ENST00000347849 ACKR2O00590 384 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 RASGRF2O14827 1237 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 UNGP13051 313 aaPredicted RBP22.58■■□□□ 1.21
PTPN18-202ENST00000347849 SMPD1P17405 629 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 COMTP21964 271 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 ACCSLQ4AC99 568 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 ATF7IP2Q5U623 682 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 PASD1Q8IV76 773 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 UBL4BQ8N7F7 174 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 NPLOC4Q8TAT6 608 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 MAML3Q96JK9 1138 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 ABCF3Q9NUQ8 709 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 PODXLO00592 558 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 RIPK2O43353 540 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 VTNP04004 478 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 CYP1A2P05177 515 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 GSTA1P08263 222 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 MYL6P60660 151 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 CLUL1Q15846 466 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 CST9Q5W186 159 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 TSHZ1Q6ZSZ6 1077 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 MIEF2Q96C03 454 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 PCDHB4Q9Y5E5 795 aa22.58■■□□□ 1.21
PTPN18-202ENST00000347849 A0A087WZ62 844 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 RBM47A0AV96 593 aaKnown RBP22.57■■□□□ 1.2
PTPN18-202ENST00000347849 GCLCP48506 637 aaPredicted RBP22.57■■□□□ 1.2
PTPN18-202ENST00000347849 AUHQ13825 339 aaKnown RBP22.57■■□□□ 1.2
PTPN18-202ENST00000347849 LRRC14Q15048 493 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 TCEAL1Q15170 157 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 ZNF568Q3ZCX4 644 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 CCDC25Q86WR0 208 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 PPTC7Q8NI37 304 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 ZNF564Q8TBZ8 553 aaPredicted RBP22.57■■□□□ 1.2
PTPN18-202ENST00000347849 FDXACB1Q9BRP7 624 aaPredicted RBP22.57■■□□□ 1.2
PTPN18-202ENST00000347849 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.57■■□□□ 1.2
PTPN18-202ENST00000347849 AGAP1Q9UPQ3 857 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 PCDHB2Q9Y5E7 798 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 UNCXA6NJT0 531 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 STRNO43815 780 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 HOXC6P09630 235 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 GRB14Q14449 540 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 CNGA2Q16280 664 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 MPZL3Q6UWV2 235 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 CCDC105Q8IYK2 499 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 MGARPQ8TDB4 240 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 C2orf40Q9H1Z8 148 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 PCYOX1Q9UHG3 505 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 PCDHA3Q9Y5H8 950 aa22.57■■□□□ 1.2
PTPN18-202ENST00000347849 TCRBV7S2A1N4TA0A589 114 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 GPR25O00155 361 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 KIF1CO43896 1103 aaKnown RBP22.56■■□□□ 1.2
PTPN18-202ENST00000347849 KCNJ1P48048 391 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 PRAMEF19Q5SWL8 479 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 KIRREL3Q8IZU9 778 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 ABRAQ8N0Z2 381 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 C2orf69Q8N8R5 385 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 PARP2Q9UGN5 583 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 CPA4Q9UI42 421 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 GTF3C4Q9UKN8 822 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 DNAH12Q6ZR08 3092 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 CTNNA2P26232 953 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 GBP2P32456 591 aaPredicted RBP22.56■■□□□ 1.2
PTPN18-202ENST00000347849 TFAMQ00059 246 aaKnown RBP22.56■■□□□ 1.2
PTPN18-202ENST00000347849 C11orf63Q6NUN7 778 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 TLDC1Q6P9B6 456 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 WDR49Q8IV35 697 aa22.56■■□□□ 1.2
PTPN18-202ENST00000347849 LINC01465Q8N7H1 131 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms