RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 FAM111AQ96PZ2 611 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 NAP1L4Q99733 375 aaKnown RBP16.15■□□□□ 0.18
LMNA-201ENST00000347559 MARCOQ9UEW3 520 aaPredicted RBP16.15■□□□□ 0.18
LMNA-201ENST00000347559 ATF5Q9Y2D1 282 aaPredicted RBP16.15■□□□□ 0.18
LMNA-201ENST00000347559 ZNF510Q9Y2H8 683 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 MEI4A8MW99 385 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 PLSCR1O15162 318 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 KRT10P13645 584 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 ZNF76P36508 570 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 NT5C2P49902 561 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 SLC18A1P54219 525 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 GSTO1P78417 241 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 DLG1Q12959 904 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 TCEAL1Q15170 157 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 MMEL1Q495T6 779 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 C1QTNF12Q5T7M4 302 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 ACAD11Q709F0 780 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 TDRPQ86YL5 185 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 ARHGEF4Q9NR80 690 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 TOGARAM1Q9Y4F4 1720 aa16.15■□□□□ 0.18
LMNA-201ENST00000347559 FAM86B1E9PN63 330 aa16.14■□□□□ 0.18
LMNA-201ENST00000347559 FAM86B2P0C5J1 330 aa16.14■□□□□ 0.18
LMNA-201ENST00000347559 TAL1P17542 331 aaPredicted RBP16.14■□□□□ 0.18
LMNA-201ENST00000347559 GALK1P51570 392 aa16.14■□□□□ 0.18
LMNA-201ENST00000347559 VAMP7P51809 220 aa16.14■□□□□ 0.18
LMNA-201ENST00000347559 HIRAP54198 1017 aaPredicted RBP16.14■□□□□ 0.18
LMNA-201ENST00000347559 AQP4P55087 323 aa16.14■□□□□ 0.18
LMNA-201ENST00000347559 PLCB3Q01970 1234 aa16.14■□□□□ 0.18
LMNA-201ENST00000347559 ASPHQ12797 758 aa16.14■□□□□ 0.18
LMNA-201ENST00000347559 TRMT5Q32P41 509 aaKnown RBP16.14■□□□□ 0.18
LMNA-201ENST00000347559 Q4G0T1 1027 aa16.14■□□□□ 0.18
LMNA-201ENST00000347559 PPP1R18Q6NYC8 613 aa16.14■□□□□ 0.18
LMNA-201ENST00000347559 RBM44Q6ZP01 1051 aaKnown RBP16.14■□□□□ 0.18
LMNA-201ENST00000347559 ZSWIM2Q8NEG5 633 aa16.14■□□□□ 0.18
LMNA-201ENST00000347559 SLC26A7Q8TE54 656 aa16.14■□□□□ 0.18
LMNA-201ENST00000347559 DHX38Q92620 1227 aaKnown RBP16.14■□□□□ 0.18
LMNA-201ENST00000347559 PHF12Q96QT6 1004 aa16.14■□□□□ 0.18
LMNA-201ENST00000347559 COL5A2P05997 1499 aaPredicted RBP16.14■□□□□ 0.17
LMNA-201ENST00000347559 EIF3DO15371 548 aaKnown RBP eCLIP16.14■□□□□ 0.17
LMNA-201ENST00000347559 DLDP09622 509 aaKnown RBP16.14■□□□□ 0.17
LMNA-201ENST00000347559 FDX1P10109 184 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 KRT5P13647 590 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 ATF7P17544 494 aaPredicted RBP16.14■□□□□ 0.17
LMNA-201ENST00000347559 RAP1GDS1P52306 607 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 CCNG2Q16589 344 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 ZNF720Q7Z2F6 126 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 NET1Q7Z628 596 aaPredicted RBP16.14■□□□□ 0.17
LMNA-201ENST00000347559 KREMEN1Q96MU8 473 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 CCDC28BQ9BUN5 200 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 ZNF232Q9UNY5 417 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 F8W8V4 182 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 LPXNO60711 386 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 LDHCP07864 332 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 CYP11B1P15538 503 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 RFX1P22670 979 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 GEMIN4P57678 1058 aaKnown RBP16.14■□□□□ 0.17
LMNA-201ENST00000347559 ACTR3P61158 418 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 CENPCQ03188 943 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 KRT72Q14CN4 511 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 WDR66Q8TBY9 1149 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 CPA5Q8WXQ8 436 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 CCDC124Q96CT7 223 aaKnown RBP16.14■□□□□ 0.17
LMNA-201ENST00000347559 DNPEPQ9ULA0 475 aa16.14■□□□□ 0.17
LMNA-201ENST00000347559 A0A0J9YVX5 310 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 GOLGA8IPA6NC78 632 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 GOLGA8JA6NMD2 632 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 SPECC1L-ADORA2AF8WAN1 911 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 DNALI1O14645 258 aaPredicted RBP16.13■□□□□ 0.17
LMNA-201ENST00000347559 MAGEB3O15480 346 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 EPHB1P54762 984 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 ALDH18A1P54886 795 aaKnown RBP16.13■□□□□ 0.17
LMNA-201ENST00000347559 SH3BGRP55822 239 aaPredicted RBP16.13■□□□□ 0.17
LMNA-201ENST00000347559 HPCAP84074 193 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 MAP3K10Q02779 954 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 SF3B3Q15393 1217 aaKnown RBP16.13■□□□□ 0.17
LMNA-201ENST00000347559 USH1GQ495M9 461 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 ANKS1BQ7Z6G8 1248 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 RELL1Q8IUW5 271 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 MAP7D3Q8IWC1 876 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 ZNF276Q8N554 614 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 PAFAH2Q99487 392 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 E5RJQ4 531 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 F5H6K3 240 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 ATP2A1O14983 1001 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 MAGEC1O60732 1142 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 KLRC2P26717 231 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 GAD2Q05329 585 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 NCOA4Q13772 614 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 QRICH1Q2TAL8 776 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 TRMT1LQ7Z2T5 733 aaKnown RBP16.13■□□□□ 0.17
LMNA-201ENST00000347559 PRPF39Q86UA1 669 aaKnown RBP16.13■□□□□ 0.17
LMNA-201ENST00000347559 USP6NLQ92738 828 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 P2RX7Q99572 595 aaKnown RBP16.13■□□□□ 0.17
LMNA-201ENST00000347559 DMAC2Q9NW81 257 aa16.13■□□□□ 0.17
LMNA-201ENST00000347559 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.13■□□□□ 0.17
LMNA-201ENST00000347559 C10orf71Q711Q0 1435 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 DNAJC6O75061 913 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 TM7SF2O76062 418 aa16.12■□□□□ 0.17
LMNA-201ENST00000347559 CENPUQ71F23 418 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms