RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CCT8L2Q96SF2 557 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 C12orf65Q9H3J6 166 aaKnown RBP14.05□□□□□ -0.16
CASC4-202ENST00000345795 SMYD2Q9NRG4 433 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 RBPJLQ9UBG7 517 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 DDX60LQ5H9U9 1706 aaKnown RBP14.05□□□□□ -0.16
CASC4-202ENST00000345795 TIAM2Q8IVF5 1701 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 FZD9O00144 591 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 P4HA1P13674 534 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 JAM2P57087 298 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 ZNF844Q08AG5 666 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 SH3PXD2AQ5TCZ1 1133 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 GKAP1Q5VSY0 366 aaPredicted RBP14.05□□□□□ -0.16
CASC4-202ENST00000345795 FAM131BQ86XD5 332 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 SLC17A8Q8NDX2 589 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 FEZF2Q8TBJ5 459 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 PYROXD1Q8WU10 500 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 C18orf25Q96B23 403 aaPredicted RBP14.05□□□□□ -0.16
CASC4-202ENST00000345795 KIAA1586Q9HCI6 787 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 PNMA3Q9UL41 463 aa14.05□□□□□ -0.16
CASC4-202ENST00000345795 GTPBP10A4D1E9 387 aaKnown RBP14.04□□□□□ -0.16
CASC4-202ENST00000345795 SCAMP3O14828 347 aaKnown RBP14.04□□□□□ -0.16
CASC4-202ENST00000345795 PPFIA4O75335 1185 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 PPP1R37O75864 691 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 EDN1P05305 212 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 FECHP22830 423 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 ZNF280AP59817 542 aaPredicted RBP14.04□□□□□ -0.16
CASC4-202ENST00000345795 MXD4Q14582 209 aaPredicted RBP14.04□□□□□ -0.16
CASC4-202ENST00000345795 RFX8Q6ZV50 586 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 MICALCLQ6ZW33 695 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 JOSD2Q8TAC2 188 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 RAPGEF5Q92565 580 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 DMAC2Q9NW81 257 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 LGALS2P05162 132 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 FDX1P10109 184 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 MARSP56192 900 aaKnown RBP14.04□□□□□ -0.16
CASC4-202ENST00000345795 PPP2R2AP63151 447 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 C1orf220Q5T0J3 134 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 IER5Q5VY09 327 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 CHADLQ6NUI6 762 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 DCLK2Q8N568 766 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 ANKS4BQ8N8V4 417 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 TFAP2BQ92481 460 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 FAM167AQ96KS9 214 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 SLITRK6Q9H5Y7 841 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.04□□□□□ -0.16
CASC4-202ENST00000345795 A6NJR5 290 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 M0QZ92 97 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 GPR25O00155 361 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 MCF2LO15068 1137 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 F7P08709 466 aaPredicted RBP14.04□□□□□ -0.16
CASC4-202ENST00000345795 NDST1P52848 882 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 NCKAP1LP55160 1127 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 MYO1EQ12965 1108 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 SGSM1Q2NKQ1 1148 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 ZACNQ401N2 412 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 FAM117BQ6P1L5 589 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 TAS1R3Q7RTX0 852 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 CTU1Q7Z7A3 348 aaKnown RBP14.04□□□□□ -0.16
CASC4-202ENST00000345795 TBC1D1Q86TI0 1168 aaPredicted RBP14.04□□□□□ -0.16
CASC4-202ENST00000345795 NLRP14Q86W24 1093 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 VSIG1Q86XK7 387 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 SPATA18Q8TC71 538 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 TTC17Q96AE7 1141 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 CFAP57Q96MR6 1250 aa14.04□□□□□ -0.16
CASC4-202ENST00000345795 CDC42EP4Q9H3Q1 356 aaKnown RBP14.04□□□□□ -0.16
CASC4-202ENST00000345795 LAMA2P24043 3122 aaKnown RBP14.04□□□□□ -0.16
CASC4-202ENST00000345795 YBX3P16989 372 aaKnown RBP eCLIP14.03□□□□□ -0.16
CASC4-202ENST00000345795 EFNA5P52803 228 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 SESN2P58004 480 aaPredicted RBP14.03□□□□□ -0.16
CASC4-202ENST00000345795 TNFAIP2Q03169 654 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 RWDD4Q6NW29 188 aaKnown RBP14.03□□□□□ -0.16
CASC4-202ENST00000345795 SCN4BQ8IWT1 228 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 ACTRT1Q8TDG2 376 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 FAF2Q96CS3 445 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 LRRC4Q9HBW1 653 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 MYPNQ86TC9 1320 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 CASTOR2A6NHX0 329 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 GH1P01241 217 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 CD48P09326 243 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 RBP3P10745 1247 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 TBXAS1P24557 533 aaPredicted RBP14.03□□□□□ -0.16
CASC4-202ENST00000345795 BYSLQ13895 437 aaKnown RBP14.03□□□□□ -0.16
CASC4-202ENST00000345795 COBLL1Q53SF7 1204 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 ABRAQ8N0Z2 381 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 PPM1NQ8N819 430 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 ACTL9Q8TC94 416 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 LPPQ93052 612 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 APOL2Q9BQE5 337 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 CDT1Q9H211 546 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 KIF9Q9HAQ2 790 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 MARCOQ9UEW3 520 aaPredicted RBP14.03□□□□□ -0.16
CASC4-202ENST00000345795 TCP11X1B4DZS4 312 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 KCNN4O15554 427 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 TJP3O95049 919 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 ZBED1O96006 694 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 CCDC130P13994 396 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 GARTP22102 1010 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 SLC8A3P57103 927 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 GOLGA7BQ2TAP0 167 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 MPZL3Q6UWV2 235 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms