RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ARGLU1Q9NWB6 273 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-202ENST00000345734 ZNF232Q9UNY5 417 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 TNFSF13BQ9Y275 285 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 CEP350Q5VT06 3117 aa9.88□□□□□ -0.83
ATG4A-202ENST00000345734 PASKQ96RG2 1323 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 CITO14578 2027 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 BRCA2P51587 3418 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 BUB1BO60566 1050 aaPredicted RBP9.87□□□□□ -0.83
ATG4A-202ENST00000345734 RTN2O75298 545 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 KIF4AO95239 1232 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 CLTAP09496 248 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 CXCL8P10145 99 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 TMOD1P28289 359 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 RNASE9P60153 205 aaKnown RBP9.87□□□□□ -0.83
ATG4A-202ENST00000345734 POU5F1BQ06416 359 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 TMEM62Q0P6H9 643 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 CRHR2Q13324 411 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 RPS6KA1Q15418 735 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 FAM187BQ17R55 369 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 CCDC181Q5TID7 509 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 ZNF572Q7Z3I7 529 aaPredicted RBP9.87□□□□□ -0.83
ATG4A-202ENST00000345734 DAAM2Q86T65 1068 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 EFCAB13Q8IY85 973 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 KIAA0319LQ8IZA0 1049 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 KAT2BQ92831 832 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 COL26A1Q96A83 441 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 GJD2Q9UKL4 321 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 STXBP5LQ9Y2K9 1186 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 HTTP42858 3142 aa9.87□□□□□ -0.83
ATG4A-202ENST00000345734 J3QL48 77 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 TNFRSF10AO00220 468 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 KCNK3O14649 394 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 MEFVO15553 781 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-202ENST00000345734 ZIC2O95409 532 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-202ENST00000345734 ADH1AP07327 375 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 ARF4P18085 180 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-202ENST00000345734 FGFR4P22455 802 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 EIF1AXP47813 144 aaKnown RBP9.86□□□□□ -0.83
ATG4A-202ENST00000345734 MYL6P60660 151 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 VSNL1P62760 191 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 TUBB4BP68371 445 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 MRPS25P82663 173 aaKnown RBP9.86□□□□□ -0.83
ATG4A-202ENST00000345734 TFAMQ00059 246 aaKnown RBP9.86□□□□□ -0.83
ATG4A-202ENST00000345734 GRM1Q13255 1194 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 DUOXA2Q1HG44 320 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 CC2D1AQ6P1N0 951 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-202ENST00000345734 TMC7Q7Z402 723 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 PEX26Q7Z412 305 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 TLK2Q86UE8 772 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 NT5DC3Q86UY8 548 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 SPATA4Q8NEY3 305 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 LMBR1Q8WVP7 490 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 RPGRIP1Q96KN7 1286 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 NCAPGQ9BPX3 1015 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 FAM49AQ9H0Q0 323 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-202ENST00000345734 PDZD7Q9H5P4 517 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 ZFYVE28Q9HCC9 887 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 RAB21Q9UL25 225 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 HCN4Q9Y3Q4 1203 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 PCDHB4Q9Y5E5 795 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 TNFRSF10BO14763 440 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 ZEB2O60315 1214 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 ZRANB2O95218 330 aaKnown RBP eCLIP9.86□□□□□ -0.83
ATG4A-202ENST00000345734 ASS1P00966 412 aaKnown RBP9.86□□□□□ -0.83
ATG4A-202ENST00000345734 SMIM10L2AP0DMW4 78 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 SMIM10L2BP0DMW5 78 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 GZMAP12544 262 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 RGS2P41220 211 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 PSMA6P60900 246 aaKnown RBP9.86□□□□□ -0.83
ATG4A-202ENST00000345734 GPC5P78333 572 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 BEX3Q00994 111 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 MTFR1Q15390 333 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 TMEM270Q6UE05 265 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 TMCO3Q6UWJ1 677 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 FAM81BQ96LP2 452 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 SCLT1Q96NL6 688 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 RPF1Q9H9Y2 349 aaKnown RBP9.86□□□□□ -0.83
ATG4A-202ENST00000345734 ABCB6Q9NP58 842 aa9.86□□□□□ -0.83
ATG4A-202ENST00000345734 RBM12Q9NTZ6 932 aaKnown RBP9.86□□□□□ -0.83
ATG4A-202ENST00000345734 TNPO2O14787 897 aaKnown RBP9.85□□□□□ -0.83
ATG4A-202ENST00000345734 TSPAN1O60635 241 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 F2P00734 622 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 STAG3L1P0CL83 205 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 CAPN2P17655 700 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 PAFAH1B1P43034 410 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 AP3M2P53677 418 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 SATB1Q01826 763 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 SURF1Q15526 300 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 CLEC16AQ2KHT3 1053 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 KIZQ2M2Z5 673 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 CFAP221Q4G0U5 840 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 SYCE1Q8N0S2 351 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 TAF4BQ92750 862 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 CTTNBP2NLQ9P2B4 639 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 ABT1Q9ULW3 272 aaKnown RBP9.85□□□□□ -0.83
ATG4A-202ENST00000345734 GINS2Q9Y248 185 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 LACTBL1A8MY62 500 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 B4GALT4O60513 344 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 NFICP08651 508 aa9.85□□□□□ -0.83
ATG4A-202ENST00000345734 TMEM191BP0C7N4 346 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms