RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 YWHABP31946 246 aaKnown RBP18.24■□□□□ 0.51
SPAST-202ENST00000345662 STX5Q13190 355 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 ACAD10Q6JQN1 1059 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 EIF1ADQ8N9N8 165 aaKnown RBP18.24■□□□□ 0.51
SPAST-202ENST00000345662 DAGLBQ8NCG7 672 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 AGAP11Q8TF27 550 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 CELF1Q92879 486 aaKnown RBP18.24■□□□□ 0.51
SPAST-202ENST00000345662 FAM217BQ9NTX9 383 aaPredicted RBP18.24■□□□□ 0.51
SPAST-202ENST00000345662 ARHGEF37A1IGU5 675 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 TM9SF1O15321 606 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 HNRNPRO43390 633 aaKnown RBP18.24■□□□□ 0.51
SPAST-202ENST00000345662 VCAM1P19320 739 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 RPA1P27694 616 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 ZNF571Q7Z3V5 609 aaPredicted RBP18.24■□□□□ 0.51
SPAST-202ENST00000345662 C2orf40Q9H1Z8 148 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 TMEM8AQ9HCN3 771 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 METTL5Q9NRN9 209 aaKnown RBP18.24■□□□□ 0.51
SPAST-202ENST00000345662 BTBD7Q9P203 1132 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 MAD2L2Q9UI95 211 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 ITGA4P13612 1032 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 AQP5P55064 265 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 ZNF543Q08ER8 600 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 STK32BQ9NY57 414 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 HACD3Q9P035 362 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 AP1G2O75843 785 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 EPHB2P29323 1055 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 PDAP1Q13442 181 aaKnown RBP18.24■□□□□ 0.51
SPAST-202ENST00000345662 KCTD17Q8N5Z5 321 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 TMEM237Q96Q45 408 aa18.24■□□□□ 0.51
SPAST-202ENST00000345662 SPHKAPQ2M3C7 1700 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 AHCYL1O43865 530 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 SERPINI2O75830 405 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 TROAPQ12815 778 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 GRB10Q13322 594 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 DMC1Q14565 340 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 SPDYCQ5MJ68 293 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 MICU2Q8IYU8 434 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 CENPTQ96BT3 561 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 OSGEPQ9NPF4 335 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 ZNF335Q9H4Z2 1342 aaPredicted RBP18.23■□□□□ 0.51
SPAST-202ENST00000345662 POLBP06746 335 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 ASNSP08243 561 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 TNFRSF8P28908 595 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 C4orf22Q6V702 233 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 FAM71DQ8N9W8 422 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 SH3GL2Q99962 352 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 ZNF341Q9BYN7 854 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 KLHL25Q9H0H3 589 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 RNPEPL1Q9HAU8 725 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 SCN3BQ9NY72 215 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.23■□□□□ 0.51
SPAST-202ENST00000345662 ZBTB39O15060 712 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 XPAP23025 273 aaPredicted RBP18.23■□□□□ 0.51
SPAST-202ENST00000345662 IFI35P80217 286 aaPredicted RBP18.23■□□□□ 0.51
SPAST-202ENST00000345662 RBBP7Q16576 425 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 TRAF7Q6Q0C0 670 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 BNC2Q6ZN30 1099 aaPredicted RBP18.23■□□□□ 0.51
SPAST-202ENST00000345662 ABCF3Q9NUQ8 709 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 C2CD2Q9Y426 696 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 CACNB3P54284 484 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 DSTYKQ6XUX3 929 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 FBXO36Q8NEA4 188 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 PRCCQ92733 491 aaPredicted RBP18.23■□□□□ 0.51
SPAST-202ENST00000345662 TEX12Q9BXU0 123 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 MTMR4Q9NYA4 1195 aa18.23■□□□□ 0.51
SPAST-202ENST00000345662 FOXN3O00409 490 aaPredicted RBP18.22■□□□□ 0.51
SPAST-202ENST00000345662 AGAP3Q96P47 875 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 PAFAH2Q99487 392 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 ILKAPQ9H0C8 392 aaPredicted RBP18.22■□□□□ 0.51
SPAST-202ENST00000345662 EFCAB1Q9HAE3 211 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 ZNF302Q9NR11 478 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 TOPORSQ9NS56 1045 aaPredicted RBP18.22■□□□□ 0.51
SPAST-202ENST00000345662 CYP39A1Q9NYL5 469 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 HUS1O60921 280 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 GLRA3O75311 464 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 PHKA2P46019 1235 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 ITGB3BPQ13352 177 aaPredicted RBP18.22■□□□□ 0.51
SPAST-202ENST00000345662 PPHLN1Q8NEY8 458 aaKnown RBP18.22■□□□□ 0.51
SPAST-202ENST00000345662 TULP4Q9NRJ4 1543 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 E5RI56 91 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 FAM58BPP0C7Q3 252 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 NME3Q13232 169 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 GRM1Q13255 1194 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 MEA1Q16626 185 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 LAYNQ6UX15 382 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 NLGN1Q8N2Q7 840 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 KRT35Q92764 455 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 ZNF212Q9UDV6 495 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 SNRPFP62306 86 aaKnown RBP18.22■□□□□ 0.51
SPAST-202ENST00000345662 LBRQ14739 615 aaKnown RBP18.22■□□□□ 0.51
SPAST-202ENST00000345662 ZNF184Q99676 751 aaPredicted RBP18.22■□□□□ 0.51
SPAST-202ENST00000345662 MYLK2Q9H1R3 596 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 NSMCE4AQ9NXX6 385 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 PCDHA10Q9Y5I2 948 aa18.22■□□□□ 0.51
SPAST-202ENST00000345662 TRPC5OSA6NMA1 111 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 FAM196BA6NMK8 535 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 CDC25CP30307 473 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 STIP1P31948 543 aaKnown RBP18.21■□□□□ 0.51
SPAST-202ENST00000345662 C6orf10Q5SRN2 563 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 F8W8V4 182 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms