RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 COL11A1P12107 1806 aaPredicted RBP20.22■□□□□ 0.83
LYSMD4-202ENST00000344791 CNTNAP2Q9UHC6 1331 aa20.22■□□□□ 0.83
LYSMD4-202ENST00000344791 CSDE1O75534 798 aaKnown RBP20.22■□□□□ 0.83
LYSMD4-202ENST00000344791 TMEM63BQ5T3F8 832 aa20.22■□□□□ 0.83
LYSMD4-202ENST00000344791 CEP120Q8N960 986 aa20.22■□□□□ 0.83
LYSMD4-202ENST00000344791 RMDN2Q96LZ7 410 aa20.22■□□□□ 0.83
LYSMD4-202ENST00000344791 SLITRK1Q96PX8 696 aa20.22■□□□□ 0.83
LYSMD4-202ENST00000344791 SPDYE16A6NNV3 312 aaPredicted RBP20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 NFKBIEO00221 500 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 LIASO43766 372 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 CDH16O75309 829 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 NRLP54845 237 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 CLDN10P78369 228 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 XRCC4Q13426 336 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 CISHQ9NSE2 258 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 H0YCG3 227 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 UBA1P22314 1058 aaKnown RBP20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 KLRC2P26717 231 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 CETN2P41208 172 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 RTP1P59025 263 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 DNAJC3Q13217 504 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 LY6KQ17RY6 165 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 DCAF15Q66K64 600 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 SYDE1Q6ZW31 735 aaPredicted RBP20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 EMC1Q8N766 993 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 TRAPPC12Q8WVT3 735 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 CNKSR2Q8WXI2 1034 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 TFAP2BQ92481 460 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 CCDC77Q9BR77 488 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 R3HDMLQ9H3Y0 253 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 ECT2Q9H8V3 914 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 WDR81Q562E7 1941 aa20.21■□□□□ 0.83
LYSMD4-202ENST00000344791 PIK3R2O00459 728 aa20.2■□□□□ 0.83
LYSMD4-202ENST00000344791 MMP8P22894 467 aa20.2■□□□□ 0.83
LYSMD4-202ENST00000344791 DALRD3Q5D0E6 543 aaKnown RBP20.2■□□□□ 0.83
LYSMD4-202ENST00000344791 SLFN12LQ6IEE8 588 aa20.2■□□□□ 0.83
LYSMD4-202ENST00000344791 SPATA21Q7Z572 469 aa20.2■□□□□ 0.83
LYSMD4-202ENST00000344791 PHF13Q86YI8 300 aaPredicted RBP20.2■□□□□ 0.83
LYSMD4-202ENST00000344791 IP6K2Q9UHH9 426 aa20.2■□□□□ 0.83
LYSMD4-202ENST00000344791 SLC12A4Q9UP95 1085 aa20.2■□□□□ 0.83
LYSMD4-202ENST00000344791 AGTPBP1Q9UPW5 1226 aa20.2■□□□□ 0.83
LYSMD4-202ENST00000344791 SUN1O94901 812 aa20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 TRPC3Q13507 836 aa20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 RNF149Q8NC42 400 aa20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 CKAP2Q8WWK9 683 aa20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 PRCCQ92733 491 aaPredicted RBP20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 CCDC134Q9H6E4 229 aa20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 PCSK1NQ9UHG2 260 aa20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 MAFBQ9Y5Q3 323 aaPredicted RBP20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 TBXAS1P24557 533 aaPredicted RBP20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 FOXN2P32314 431 aa20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 TGFB2P61812 414 aa20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 CAV1Q03135 178 aa20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 PKN2Q16513 984 aaKnown RBP20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 NLRP4Q96MN2 994 aa20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 PCYT2Q99447 389 aa20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 SLCO1B3Q9NPD5 702 aa20.2■□□□□ 0.82
LYSMD4-202ENST00000344791 NFASCO94856 1347 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 TMEM191CA6NGB0 347 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 A8MUI8 341 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 LDHAP00338 332 aaKnown RBP20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 TMEM191BP0C7N4 346 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 GHRP10912 638 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 TCF7P36402 384 aaPredicted RBP20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 ARL2P36404 184 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 CDH8P55286 799 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 C1QBPQ07021 282 aaKnown RBP20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 TRIM72Q6ZMU5 477 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 CATSPERGQ6ZRH7 1159 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 NCAPG2Q86XI2 1143 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 FITM2Q8N6M3 262 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 POLIQ9UNA4 740 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 L3MBTL1Q9Y468 752 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 AFG3L2Q9Y4W6 797 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 CENPFP49454 3210 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 DNAJC8O75937 253 aaPredicted RBP20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 STAT5BP51692 787 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 PDIA2Q13087 525 aaKnown RBP20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 SPOCD1Q6ZMY3 1216 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 ERICH1Q86X53 443 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 STYXL1Q9Y6J8 313 aa20.19■□□□□ 0.82
LYSMD4-202ENST00000344791 TJP3O95049 919 aa20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 ZNF280AP59817 542 aaPredicted RBP20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 EFTUD2Q15029 972 aaKnown RBP eCLIP20.18■□□□□ 0.821e-5■■■□□ 15.7
LYSMD4-202ENST00000344791 TREML2Q5T2D2 321 aa20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 SWT1Q5T5J6 900 aaKnown RBP20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 CGB2Q6NT52 195 aa20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 ARHGEF18Q6ZSZ5 1173 aa20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 C12orf65Q9H3J6 166 aaKnown RBP20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 IGF2BP3O00425 579 aaKnown RBP eCLIP20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 RPSAP08865 295 aaKnown RBP20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 RFC1P35251 1148 aaPredicted RBP20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 GDF10P55107 478 aa20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 MCCD1P59942 119 aaPredicted RBP20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 WDR72Q3MJ13 1102 aa20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 RHPN2Q8IUC4 686 aa20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 ZCCHC9Q8N567 271 aaKnown RBP20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 TRPM4Q8TD43 1214 aa20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 P3H4Q92791 437 aa20.18■□□□□ 0.82
LYSMD4-202ENST00000344791 KLF6Q99612 283 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms