RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 LPCAT2Q7L5N7 544 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 CDC26Q8NHZ8 85 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 FEZF2Q8TBJ5 459 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 TMEM8AQ9HCN3 771 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 NSMCE4AQ9NXX6 385 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 GLRA3O75311 464 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 SMAD1Q15797 465 aaKnown RBP18.88■□□□□ 0.61
SMC4-201ENST00000344722 RNF135Q8IUD6 432 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 GDPD5Q8WTR4 605 aa18.88■□□□□ 0.61
SMC4-201ENST00000344722 NSUN4Q96CB9 384 aaKnown RBP18.88■□□□□ 0.61
SMC4-201ENST00000344722 TRPC5OSA6NMA1 111 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 H2AFYO75367 372 aaKnown RBP18.87■□□□□ 0.61
SMC4-201ENST00000344722 PSMG1O95456 288 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 MTFR1Q15390 333 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 CROCCP3Q8IVE0 287 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 PAFAH2Q99487 392 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 POLR3FQ9H1D9 316 aaPredicted RBP18.87■□□□□ 0.61
SMC4-201ENST00000344722 SCN3BQ9NY72 215 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 GTPBP10A4D1E9 387 aaKnown RBP18.87■□□□□ 0.61
SMC4-201ENST00000344722 TRAF7Q6Q0C0 670 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 SPATA18Q8TC71 538 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 ATG4AQ8WYN0 398 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 SALL1Q9NSC2 1324 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 IQCA1LA6NCM1 817 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 PDE2AO00408 941 aaPredicted RBP18.87■□□□□ 0.61
SMC4-201ENST00000344722 CST8O60676 142 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 CDC25CP30307 473 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 EFCAB1Q9HAE3 211 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 METTL5Q9NRN9 209 aaKnown RBP18.87■□□□□ 0.61
SMC4-201ENST00000344722 UNC5CO95185 931 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 PEX5P50542 639 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 MROH9Q5TGP6 573 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 EP400NLQ6ZTU2 488 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 NUP93Q8N1F7 819 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 FBXO36Q8NEA4 188 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 APBB2Q92870 758 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 FAM237AA0A1B0GTK4 181 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 ABLIM1O14639 778 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 ATP9BO43861 1147 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 ATP5BP06576 529 aaKnown RBP18.87■□□□□ 0.61
SMC4-201ENST00000344722 DCTN2Q13561 401 aaKnown RBP18.87■□□□□ 0.61
SMC4-201ENST00000344722 RNF43Q68DV7 783 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 FAM81AQ8TBF8 368 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 COA1Q9GZY4 146 aa18.87■□□□□ 0.61
SMC4-201ENST00000344722 IQGAP1P46940 1657 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 OPLAHO14841 1288 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 DRD4P21917 467 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 RPA1P27694 616 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 DUOXA2Q1HG44 320 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 ANGPTL8Q6UXH0 198 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 OSGEPQ9NPF4 335 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 DCDC2Q9UHG0 476 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 GZMAP12544 262 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 VCPP55072 806 aaKnown RBP18.86■□□□□ 0.61
SMC4-201ENST00000344722 NTRK3Q16288 839 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 TRIM60Q495X7 471 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 KRT35Q92764 455 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 FAM167AQ96KS9 214 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 SHCBP1LQ9BZQ2 653 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 SYBUQ9NX95 663 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 COMMD3-BMI1R4GMX3 469 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 RBP3P10745 1247 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 PSMA4P25789 261 aaKnown RBP18.86■□□□□ 0.61
SMC4-201ENST00000344722 CLK1P49759 484 aaKnown RBP18.86■□□□□ 0.61
SMC4-201ENST00000344722 UBE2Q2LH0YL09 131 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 USP1O94782 785 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 GH2P01242 217 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 APOA4P06727 396 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 MYBL2P10244 700 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 ATP6V1C1P21283 382 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 USP10Q14694 798 aaKnown RBP18.86■□□□□ 0.61
SMC4-201ENST00000344722 ZNF568Q3ZCX4 644 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 ZC2HC1CQ53FD0 456 aaPredicted RBP18.86■□□□□ 0.61
SMC4-201ENST00000344722 PLEKHA7Q6IQ23 1121 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 B3GNT6Q6ZMB0 384 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 PATL1Q86TB9 770 aaKnown RBP18.86■□□□□ 0.61
SMC4-201ENST00000344722 FAM84BQ96KN1 310 aaPredicted RBP18.86■□□□□ 0.61
SMC4-201ENST00000344722 NLRP4Q96MN2 994 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 ILKAPQ9H0C8 392 aaPredicted RBP18.86■□□□□ 0.61
SMC4-201ENST00000344722 FEM1BQ9UK73 627 aa18.86■□□□□ 0.61
SMC4-201ENST00000344722 NBPF26B4DH59 902 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 POLBP06746 335 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 RPL21P46778 160 aaKnown RBP18.85■□□□□ 0.61
SMC4-201ENST00000344722 TROAPQ12815 778 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 TSTA3Q13630 321 aaPredicted RBP18.85■□□□□ 0.61
SMC4-201ENST00000344722 NBPF15Q8N660 670 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 F8W8V4 182 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 PIK3CDO00329 1044 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 DLGAP3O95886 979 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 STIP1P31948 543 aaKnown RBP18.85■□□□□ 0.61
SMC4-201ENST00000344722 HADHAP40939 763 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 RPS6P62753 249 aaKnown RBP18.85■□□□□ 0.61
SMC4-201ENST00000344722 CCNG2Q16589 344 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 CCDC103Q8IW40 242 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 OXNAD1Q96HP4 312 aaPredicted RBP18.85■□□□□ 0.61
SMC4-201ENST00000344722 GORASP1Q9BQQ3 440 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 DMAP1Q9NPF5 467 aaPredicted RBP18.85■□□□□ 0.61
SMC4-201ENST00000344722 DDX18Q9NVP1 670 aaKnown RBP18.85■□□□□ 0.61
SMC4-201ENST00000344722 STARD13Q9Y3M8 1113 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 ABCA9Q8IUA7 1624 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms