RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 CYP24A1Q07973 514 aa19.43■□□□□ 0.7
USF2-202ENST00000343550 MYBPC2Q14324 1141 aa19.43■□□□□ 0.7
USF2-202ENST00000343550 ANGPT1Q15389 498 aa19.43■□□□□ 0.7
USF2-202ENST00000343550 VARS2Q5ST30 1063 aaKnown RBP19.43■□□□□ 0.7
USF2-202ENST00000343550 SCARA3Q6AZY7 606 aa19.43■□□□□ 0.7
USF2-202ENST00000343550 FRMD5Q7Z6J6 570 aa19.43■□□□□ 0.7
USF2-202ENST00000343550 CXorf38Q8TB03 319 aa19.43■□□□□ 0.7
USF2-202ENST00000343550 ARHGEF3Q9NR81 526 aa19.43■□□□□ 0.7
USF2-202ENST00000343550 INTS13Q9NVM9 706 aa19.43■□□□□ 0.7
USF2-202ENST00000343550 HCFC1R1Q9NWW0 138 aa19.43■□□□□ 0.7
USF2-202ENST00000343550 DNMT3BQ9UBC3 853 aaKnown RBP19.43■□□□□ 0.7
USF2-202ENST00000343550 PCDHB8Q9UN66 801 aa19.43■□□□□ 0.7
USF2-202ENST00000343550 CALUO43852 315 aaPredicted RBP19.42■□□□□ 0.7
USF2-202ENST00000343550 TBC1D4O60343 1298 aa19.42■□□□□ 0.7
USF2-202ENST00000343550 NR3C1P04150 777 aa19.42■□□□□ 0.7
USF2-202ENST00000343550 PRCPP42785 496 aa19.42■□□□□ 0.7
USF2-202ENST00000343550 PSMD6Q15008 389 aa19.42■□□□□ 0.7
USF2-202ENST00000343550 LMBRD2Q68DH5 695 aaPredicted RBP19.42■□□□□ 0.7
USF2-202ENST00000343550 SLC8B1Q6J4K2 584 aa19.42■□□□□ 0.7
USF2-202ENST00000343550 PHLDB3Q6NSJ2 640 aa19.42■□□□□ 0.7
USF2-202ENST00000343550 CSGALNACT2Q8N6G5 542 aa19.42■□□□□ 0.7
USF2-202ENST00000343550 C1orf127Q8N9H9 656 aa19.42■□□□□ 0.7
USF2-202ENST00000343550 APPL2Q8NEU8 664 aa19.42■□□□□ 0.7
USF2-202ENST00000343550 ZNF461Q8TAF7 563 aa19.42■□□□□ 0.7
USF2-202ENST00000343550 FAM84AQ96KN4 292 aa19.42■□□□□ 0.7
USF2-202ENST00000343550 CFAP54Q96N23 3096 aa19.42■□□□□ 0.7
USF2-202ENST00000343550 VPS13AQ96RL7 3174 aa19.42■□□□□ 0.7
USF2-202ENST00000343550 DOCK6Q96HP0 2047 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 PRR23AA6NEV1 266 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 GPC5P78333 572 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 NFIL3Q16649 462 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 DUOXA2Q1HG44 320 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 PABPC1LQ4VXU2 614 aaKnown RBP19.41■□□□□ 0.7
USF2-202ENST00000343550 COBLL1Q53SF7 1204 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 DSTYKQ6XUX3 929 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 MTSS1LQ765P7 747 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 OR5B17Q8NGF7 314 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 CCDC127Q96BQ5 260 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 BORCS6Q96GS4 357 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 SENP8Q96LD8 212 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 GTPBP4Q9BZE4 634 aaKnown RBP19.41■□□□□ 0.7
USF2-202ENST00000343550 GZF1Q9H116 711 aaPredicted RBP19.41■□□□□ 0.7
USF2-202ENST00000343550 AGAP1Q9UPQ3 857 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 SIT1Q9Y3P8 196 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 TIMM13Q9Y5L4 95 aaPredicted RBP19.41■□□□□ 0.7
USF2-202ENST00000343550 PTPRJQ12913 1337 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 DMDP11532 3685 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 H7C4K7 107 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 ABLIM3O94929 683 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 OAZ2O95190 189 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 ITGB3P05106 788 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 TMEM191BP0C7N4 346 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 CASP4P49662 377 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 ROR1Q01973 937 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 ISM2Q6H9L7 571 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 WDR49Q8IV35 697 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 NKD2Q969F2 451 aaPredicted RBP19.41■□□□□ 0.7
USF2-202ENST00000343550 ANKRD36BP1Q96IX9 119 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 FNBP1Q96RU3 617 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 MTMR12Q9C0I1 747 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 LMBRD1Q9NUN5 540 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 MAN1B1Q9UKM7 699 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 ITGA11Q9UKX5 1188 aa19.41■□□□□ 0.7
USF2-202ENST00000343550 SCN1AP35498 2009 aa19.4■□□□□ 0.7
USF2-202ENST00000343550 DLATP10515 647 aaKnown RBP19.4■□□□□ 0.7
USF2-202ENST00000343550 TNNI1P19237 187 aa19.4■□□□□ 0.7
USF2-202ENST00000343550 POLR2BP30876 1174 aaKnown RBP19.4■□□□□ 0.7
USF2-202ENST00000343550 TAF6P49848 677 aa19.4■□□□□ 0.7
USF2-202ENST00000343550 ZCWPW2Q504Y3 356 aa19.4■□□□□ 0.7
USF2-202ENST00000343550 NPAS3Q8IXF0 933 aa19.4■□□□□ 0.7
USF2-202ENST00000343550 PLEKHO2Q8TD55 490 aa19.4■□□□□ 0.7
USF2-202ENST00000343550 ZNF516Q92618 1163 aa19.4■□□□□ 0.7
USF2-202ENST00000343550 SIX4Q9UIU6 781 aa19.4■□□□□ 0.7
USF2-202ENST00000343550 ARHGEF37A1IGU5 675 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 WDR27A2RRH5 827 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 KPNA7A9QM74 516 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 TNNC2P02585 160 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 DCNP07585 359 aaKnown RBP19.39■□□□□ 0.69
USF2-202ENST00000343550 RHOP08100 348 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 TYMPP19971 482 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 ELF1P32519 619 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 ARPP19P56211 112 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 RBP5P82980 135 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 YWHAHQ04917 246 aaPredicted RBP19.39■□□□□ 0.69
USF2-202ENST00000343550 ADAM9Q13443 819 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 CAMK4Q16566 473 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 CTXN3Q4LDR2 81 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 CENPPQ6IPU0 288 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 ADSSL1Q8N142 457 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 PARD3BQ8TEW8 1205 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 CGRRF1Q99675 332 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 FBXL5Q9UKA1 691 aa19.39■□□□□ 0.69
USF2-202ENST00000343550 MRPS23Q9Y3D9 190 aaKnown RBP19.39■□□□□ 0.69
USF2-202ENST00000343550 CYB561D2O14569 222 aa19.38■□□□□ 0.69
USF2-202ENST00000343550 PRRG1O14668 218 aa19.38■□□□□ 0.69
USF2-202ENST00000343550 KRT19P08727 400 aa19.38■□□□□ 0.69
USF2-202ENST00000343550 ATF2P15336 505 aa19.38■□□□□ 0.69
USF2-202ENST00000343550 BMP6P22004 513 aa19.38■□□□□ 0.69
USF2-202ENST00000343550 NR2F2P24468 414 aa19.38■□□□□ 0.69
USF2-202ENST00000343550 RPL13P26373 211 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms