RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 MAP7Q14244 749 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 CRYMQ14894 314 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 RSPH3Q86UC2 560 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 RASSF3Q86WH2 238 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 TRIM42Q8IWZ5 723 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 NDUFAF2Q8N183 169 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 NLRP7Q8WX94 980 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 PIK3R5Q8WYR1 880 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 ANLNQ9NQW6 1124 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 SENP1Q9P0U3 644 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 FNDC3AQ9Y2H6 1198 aaKnown RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 RGPD1P0DJD0 1748 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 GPC4O75487 556 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 ARL4AP40617 200 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 GPC3P51654 580 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 DGKZQ13574 1117 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 DCAF15Q66K64 600 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 SYDE1Q6ZW31 735 aaPredicted RBP13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 MTMR12Q9C0I1 747 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 BATF3Q9NR55 127 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 R3HDM2Q9Y2K5 976 aaKnown RBP13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 NID2Q14112 1375 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 ABCC6O95255 1503 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 PFDN1O60925 122 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 PROSCO94903 275 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 RPA3P35244 121 aaPredicted RBP13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 CUL2Q13617 745 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 TFDP2Q14188 446 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 STXBP2Q15833 593 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 CIAPIN1Q6FI81 312 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 ZDHHC15Q96MV8 337 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 HSD17B14Q9BPX1 270 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 TUBB6Q9BUF5 446 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 GPATCH2LQ9NWQ4 482 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 P4HA2O15460 535 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 DDX3YO15523 660 aaKnown RBP13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 GHRP10912 638 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 MYL2P10916 166 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 BGNP21810 368 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 TYK2P29597 1187 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 BAG6P46379 1132 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 GEMIN4P57678 1058 aaKnown RBP13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 EN1Q05925 392 aaPredicted RBP13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 ITKQ08881 620 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 SWT1Q5T5J6 900 aaKnown RBP13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 TRIM72Q6ZMU5 477 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 LRRC43Q8N309 656 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 TCP10LQ8TDR4 215 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 PSPC1Q8WXF1 523 aaKnown RBP13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 MTBPQ96DY7 904 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 FAM163AQ96GL9 167 aaPredicted RBP13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 PAFAH2Q99487 392 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 NUF2Q9BZD4 464 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 FAM49BQ9NUQ9 324 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 ASNSD1Q9NWL6 643 aa13.05□□□□□ -0.32
SNRNP48-201ENST00000342415 GSTA1P08263 222 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 TM4SF1P30408 202 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 EMC2Q15006 297 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 VPS72Q15906 364 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 CLEC16AQ2KHT3 1053 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 IL31RAQ8NI17 732 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 FHDC1Q9C0D6 1143 aaPredicted RBP13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 RANBP17Q9H2T7 1088 aaKnown RBP13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 SLC12A6Q9UHW9 1150 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 CRCPO75575 148 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 LMNAP02545 664 aaKnown RBP13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 VCAM1P19320 739 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 SDC4P31431 198 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 MMP13P45452 471 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 FMO1Q01740 532 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 CHI3L2Q15782 390 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 KDELC2Q7Z4H8 507 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 CCNYL1Q8N7R7 359 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 CCT6BQ92526 530 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 FGD4Q96M96 766 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 RPS6KA2Q15349 733 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 COBLL1Q53SF7 1204 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 SLC30A9Q6PML9 568 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 LRRC6Q86X45 466 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 MIEF2Q96C03 454 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 GMCL1Q96IK5 515 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 MOV10L1Q9BXT6 1211 aaKnown RBP13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 FAM198AQ9UFP1 575 aa13.04□□□□□ -0.32
SNRNP48-201ENST00000342415 GSTA2P09210 222 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 PYGBP11216 843 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 TCN1P20061 433 aaPredicted RBP13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 SNX16P57768 344 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 CENPCQ03188 943 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 CUL3Q13618 768 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 PRPF39Q86UA1 669 aaKnown RBP13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 SEMA4DQ92854 862 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 KIAA1683Q9H0B3 1180 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 STRIP2Q9ULQ0 834 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 FZD1Q9UP38 647 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 BAZ2AQ9UIF9 1905 aaKnown RBP13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 SLIT3O75094 1523 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 ATP9BO43861 1147 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 PSMD10O75832 226 aa13.03□□□□□ -0.32
SNRNP48-201ENST00000342415 SERPINB3P29508 390 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms