RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 MARCH8Q5T0T0 291 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 DDX42Q86XP3 938 aaKnown RBP eCLIP13.86□□□□□ -0.19
COL18A1-201ENST00000342220 BRSK2Q8IWQ3 736 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 ARMC2Q8NEN0 867 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 OR6B3Q8NGW1 331 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 SOCS4Q8WXH5 440 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 CGRRF1Q99675 332 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 SMYD3Q9H7B4 428 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 KAT6AQ92794 2004 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 MEIS3P2A8K0S8 358 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 FAM155AB1AL88 458 aaPredicted RBP13.86□□□□□ -0.19
COL18A1-201ENST00000342220 HCRTO43612 131 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 RPSAP08865 295 aaKnown RBP13.86□□□□□ -0.19
COL18A1-201ENST00000342220 EIF4BP23588 611 aaKnown RBP13.86□□□□□ -0.19
COL18A1-201ENST00000342220 NUP85Q9BW27 656 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 ANAPC7Q9UJX3 599 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 TMEM59LQ9UK28 342 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 GJD2Q9UKL4 321 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 SLC45A1Q9Y2W3 748 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 OTOFQ9HC10 1997 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 SYNJ2BP-COX16A0A087WUM0 186 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 GTPBP10A4D1E9 387 aaKnown RBP13.86□□□□□ -0.19
COL18A1-201ENST00000342220 TTC36A6NLP5 189 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 PPEF2O14830 753 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 RTP1P59025 263 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 ADCY2Q08462 1091 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 ZC3H12AQ5D1E8 599 aaKnown RBP13.86□□□□□ -0.19
COL18A1-201ENST00000342220 CEP85LQ5SZL2 805 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 DCUN1D2Q6PH85 259 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 MAATS1Q7Z4T9 603 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 MREGQ8N565 214 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 TTC16Q8NEE8 873 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 TMC2Q8TDI7 906 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 PDZD7Q9H5P4 517 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 CISHQ9NSE2 258 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 COX16Q9P0S2 106 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 NDUFAB1O14561 156 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 ZPBP2Q6X784 338 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 EXOC8Q8IYI6 725 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 LRRC57Q8N9N7 239 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 C1orf131Q8NDD1 294 aaKnown RBP13.85□□□□□ -0.19
COL18A1-201ENST00000342220 SH3GL3Q99963 347 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 GPR88Q9GZN0 384 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 PLAAQ9Y263 795 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 I3L4J1 428 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 ASAP2O43150 1006 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 TSPAN1O60635 241 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 RECQL4O94761 1208 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 C4BPAP04003 597 aaKnown RBP13.85□□□□□ -0.19
COL18A1-201ENST00000342220 RRM1P23921 792 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 VPS41P49754 854 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 E2F5Q15329 346 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 KAZNQ674X7 775 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 WHAMMQ8TF30 809 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 HPDLQ96IR7 371 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 HEMGNQ9BXL5 484 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 TMEM134Q9H6X4 195 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 ADAM22Q9P0K1 906 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 TUBGCP4Q9UGJ1 667 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 AMFRQ9UKV5 643 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 MYO9BQ13459 2157 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 NR1D1P20393 614 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 JAM2P57087 298 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 KDM7AQ6ZMT4 941 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 C12orf29Q8N999 325 aa13.85□□□□□ -0.19
COL18A1-201ENST00000342220 DDX47Q9H0S4 455 aaKnown RBP13.85□□□□□ -0.19
COL18A1-201ENST00000342220 NRCAMQ92823 1304 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 A6NJR5 290 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 BTNL10A8MVZ5 291 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 VEGFBP49765 207 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 SNX1Q13596 522 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 MYBPC2Q14324 1141 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 SLC10A6Q3KNW5 377 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 C12orf56Q8IXR9 622 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 OR2W6PQ8NHA6 318 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 TPCN2Q8NHX9 752 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 OSBPL7Q9BZF2 842 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 HMGXB4Q9UGU5 601 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 GNEQ9Y223 722 aaKnown RBP13.84□□□□□ -0.19
COL18A1-201ENST00000342220 CDY2AQ9Y6F7 541 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 POMCP01189 267 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 CLTAP09496 248 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 ECHS1P30084 290 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 MARCKSL1P49006 195 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 RABGGTBP53611 331 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 CDO1Q16878 200 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 C10orf76Q5T2E6 689 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 RNF187Q5TA31 235 aaPredicted RBP13.84□□□□□ -0.19
COL18A1-201ENST00000342220 C1orf127Q8N9H9 656 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 FZD8Q9H461 694 aa13.84□□□□□ -0.19
COL18A1-201ENST00000342220 RRN3P2A6NIE6 340 aa13.83□□□□□ -0.19
COL18A1-201ENST00000342220 ENO4A6NNW6 628 aa13.83□□□□□ -0.19
COL18A1-201ENST00000342220 GAS2O43903 313 aaKnown RBP13.83□□□□□ -0.19
COL18A1-201ENST00000342220 GBP2P32456 591 aaPredicted RBP13.83□□□□□ -0.19
COL18A1-201ENST00000342220 LSP1P33241 339 aa13.83□□□□□ -0.19
COL18A1-201ENST00000342220 GDF6Q6KF10 455 aaPredicted RBP13.83□□□□□ -0.19
COL18A1-201ENST00000342220 CD302Q8IX05 232 aa13.83□□□□□ -0.19
COL18A1-201ENST00000342220 PBKQ96KB5 322 aa13.83□□□□□ -0.19
COL18A1-201ENST00000342220 ATP6V1G3Q96LB4 118 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms