RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 MCL1Q07820 350 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 TTLL12Q14166 644 aaPredicted RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 FAM102AQ5T9C2 384 aaPredicted RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 LAYNQ6UX15 382 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 FAM196AQ6ZSG2 479 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 ZCCHC23Q6ZST2 131 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 TMEM179Q6ZVK1 233 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 RYBPQ8N488 228 aaPredicted RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 GORASP1Q9BQQ3 440 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 CCDC90BQ9GZT6 254 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 C20orf96Q9NUD7 363 aaPredicted RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 P4HA1P13674 534 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 RPS6P62753 249 aaKnown RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 CYP4A22Q5TCH4 519 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 DCAF4Q8WV16 495 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 PPP2R3CQ969Q6 453 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 TLCD1Q96CP7 247 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 ING2Q9H160 280 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 RBAKQ9NYW8 714 aaPredicted RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 ZNF335Q9H4Z2 1342 aaPredicted RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 BANF1O75531 89 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 SP100P23497 879 aaPredicted RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 USP4Q13107 963 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 CWF19L1Q69YN2 538 aaKnown RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 EEPD1Q7L9B9 569 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 MCF2L2Q86YR7 1114 aa13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 ASCC2Q9H1I8 757 aaPredicted RBP13.12□□□□□ -0.31
SSX2IP-201ENST00000342203 USP1O94782 785 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 CAMTA2O94983 1202 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 GYS1P13807 737 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 NUDT2P50583 147 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 AP1B1Q10567 949 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 IFRD2Q12894 506 aaPredicted RBP13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 FLOT2Q14254 428 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 ECM1Q16610 540 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 TRMT5Q32P41 509 aaKnown RBP13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 TMEM119Q4V9L6 283 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 PALB2Q86YC2 1186 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 UCMAQ8WVF2 138 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 ZMAT2Q96NC0 199 aaKnown RBP13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 CDCA7Q9BWT1 371 aaPredicted RBP13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 TDRD3Q9H7E2 651 aaKnown RBP13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 DAGLAQ9Y4D2 1042 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 E7ENQ6 273 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 OSBPP22059 807 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 LRRC8EQ6NSJ5 796 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 TMPRSS6Q8IU80 811 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 RNF169Q8NCN4 708 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 SDCCAG3Q96C92 435 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 TUFT1Q9NNX1 390 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 SSX2IPQ9Y2D8 614 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 FAM237BA0A1B0GVD1 139 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 PIK3CDO00329 1044 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 NDUFB10O96000 172 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 GZMAP12544 262 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 TAC1P20366 129 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 ARL4AP40617 200 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 POU5F1BQ06416 359 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 MORF4L2Q15014 288 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 OASLQ15646 514 aaKnown RBP13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 NPY5RQ15761 445 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 CCDC92Q53HC0 331 aaPredicted RBP13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 EFHC1Q5JVL4 640 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 HABP4Q5JVS0 413 aaKnown RBP13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 NOP9Q86U38 636 aaKnown RBP13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 MTMR9Q96QG7 549 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 DNPEPQ9ULA0 475 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 TSC22D4Q9Y3Q8 395 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 PCDHA3Q9Y5H8 950 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 C2orf71A6NGG8 1288 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 ANKRD63C9JTQ0 380 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 EIF3DO15371 548 aaKnown RBP eCLIP13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 PIGWQ7Z7B1 504 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 PPIL6Q8IXY8 311 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 DEFB107AQ8IZN7 70 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 GPD1LQ8N335 351 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 FAM81AQ8TBF8 368 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 DCUN1D5Q9BTE7 237 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 MRPL1Q9BYD6 325 aaKnown RBP13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 SLC38A10Q9HBR0 1119 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 GABBR1Q9UBS5 961 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 KCNG1Q9UIX4 513 aa13.11□□□□□ -0.31
SSX2IP-201ENST00000342203 LCA5LO95447 670 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 HLA-DRAP01903 254 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 SLC45A4Q5BKX6 768 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 SLC27A3Q5K4L6 730 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 PPP1R15BQ5SWA1 713 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.1□□□□□ -0.313e-9■■■■■ 348.1
SSX2IP-201ENST00000342203 FEZF2Q8TBJ5 459 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 CMTM5Q96DZ9 223 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 OXNAD1Q96HP4 312 aaPredicted RBP13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 TNS3Q68CZ2 1445 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 IGSF9BQ9UPX0 1349 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 A0A1W2PPM1 405 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 GNGT2O14610 69 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 HNRNPRO43390 633 aaKnown RBP13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 TBC1D12O60347 775 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 KLHL2O95198 593 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 KIF19Q2TAC6 998 aa13.1□□□□□ -0.31
SSX2IP-201ENST00000342203 KHDC1Q4VXA5 237 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms