RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 SOX11P35716 441 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 RAD23BP54727 409 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 OTUD4Q01804 1114 aaKnown RBP12.57□□□□□ -0.4
CDH5-201ENST00000341529 TRMT10CQ7L0Y3 403 aaKnown RBP12.57□□□□□ -0.4
CDH5-201ENST00000341529 HPDLQ96IR7 371 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 VCXQ9H320 206 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 RGPD2P0DJD1 1756 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 LOC100653049A0A140TA62 436 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 CCT8L1PA6NM43 557 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 F8VP50 259 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 IGF2BP3O00425 579 aaKnown RBP eCLIP12.57□□□□□ -0.4
CDH5-201ENST00000341529 KRT34O76011 436 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 ENO1P06733 434 aaKnown RBP12.57□□□□□ -0.4
CDH5-201ENST00000341529 CYP2B6P20813 491 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 TARSP26639 723 aaKnown RBP12.57□□□□□ -0.4
CDH5-201ENST00000341529 CTCFP49711 727 aaPredicted RBP12.57□□□□□ -0.4
CDH5-201ENST00000341529 ALDH18A1P54886 795 aaKnown RBP12.57□□□□□ -0.4
CDH5-201ENST00000341529 AGBL2Q5U5Z8 902 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 C11orf63Q6NUN7 778 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 AGBL3Q8NEM8 1001 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 BEST2Q8NFU1 509 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 ZNF606Q8WXB4 792 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 CLMNQ96JQ2 1002 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 INPP4AQ96PE3 977 aaPredicted RBP12.57□□□□□ -0.4
CDH5-201ENST00000341529 A1CFQ9NQ94 594 aaKnown RBP12.57□□□□□ -0.4
CDH5-201ENST00000341529 ABCF3Q9NUQ8 709 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 USH1CQ9Y6N9 552 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 FRMPD4Q14CM0 1322 aa12.57□□□□□ -0.4
CDH5-201ENST00000341529 SUPT20HL2P0C7V6 817 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 TSTA3Q13630 321 aaPredicted RBP12.56□□□□□ -0.4
CDH5-201ENST00000341529 DCAF6Q58WW2 860 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 MFSD7Q6UXD7 560 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 CPNE8Q86YQ8 564 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 C4orf19Q8IY42 314 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 ABI1Q8IZP0 508 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 PDCD6IPQ8WUM4 868 aaKnown RBP12.56□□□□□ -0.4
CDH5-201ENST00000341529 TTC25Q96NG3 672 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 ARL2BPQ9Y2Y0 163 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 NEMP1O14524 444 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 POLE2P56282 527 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 EXOC8Q8IYI6 725 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 NETO2Q8NC67 525 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 RNF139Q8WU17 664 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 COPS5Q92905 334 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 APOL2Q9BQE5 337 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 POLIQ9UNA4 740 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 A0A087WZ62 844 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 PLSCR1O15162 318 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 DCTN3O75935 186 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 FDX1P10109 184 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 SSTR1P30872 391 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 ITGB3BPQ13352 177 aaPredicted RBP12.56□□□□□ -0.4
CDH5-201ENST00000341529 THOC5Q13769 683 aaKnown RBP12.56□□□□□ -0.4
CDH5-201ENST00000341529 KLHL38Q2WGJ6 581 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 CRY2Q49AN0 593 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 C9orf131Q5VYM1 1079 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 PCNX4Q63HM2 1172 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 WDR75Q8IWA0 830 aaKnown RBP12.56□□□□□ -0.4
CDH5-201ENST00000341529 PIP4K2CQ8TBX8 421 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 FAM111AQ96PZ2 611 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 FDXACB1Q9BRP7 624 aaPredicted RBP12.56□□□□□ -0.4
CDH5-201ENST00000341529 CCDC68Q9H2F9 335 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 AKAP12Q02952 1782 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 C19orf81C9J6K1 198 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 P4HA2O15460 535 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 GBP7Q8N8V2 638 aaPredicted RBP12.56□□□□□ -0.4
CDH5-201ENST00000341529 CEP120Q8N960 986 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 GSDMBQ8TAX9 411 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 CAVIN3Q969G5 261 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 GPRASP2Q96D09 838 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 ZBTB10Q96DT7 871 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 YIPF3Q9GZM5 350 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 ERVK-5Q9HDB9 667 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 RIPK3Q9Y572 518 aa12.56□□□□□ -0.4
CDH5-201ENST00000341529 CACNA1FO60840 1977 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 GZMAP12544 262 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 ABCD1P33897 745 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 PTK7Q13308 1070 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 MXD4Q14582 209 aaPredicted RBP12.55□□□□□ -0.4
CDH5-201ENST00000341529 MCOLN2Q8IZK6 566 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 MKL1Q969V6 931 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 TCRBV7S2A1N4TA0A589 114 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 APOL1O14791 398 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 OGTO15294 1046 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 SMIM24O75264 130 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 UBOX5O94941 541 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 RARGP13631 454 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 C1orf146Q5VVC0 180 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 PPP1R2P3Q6NXS1 205 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 CCDC117Q8IWD4 279 aaPredicted RBP12.55□□□□□ -0.4
CDH5-201ENST00000341529 SMARCAD1Q9H4L7 1026 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 ZFATQ9P243 1243 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 DDX20Q9UHI6 824 aaKnown RBP12.55□□□□□ -0.4
CDH5-201ENST00000341529 GTPBP10A4D1E9 387 aaKnown RBP12.55□□□□□ -0.4
CDH5-201ENST00000341529 TNFAIP2Q03169 654 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 BMPR2Q13873 1038 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 PRPSAP1Q14558 356 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 PACS2Q86VP3 889 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 FAM131BQ86XD5 332 aa12.55□□□□□ -0.4
CDH5-201ENST00000341529 LRRC43Q8N309 656 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms