RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 TRPC5Q9UL62 973 aaPredicted RBP15.54■□□□□ 0.08
RRP1B-201ENST00000340648 ATP9BO43861 1147 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 AP3M2P53677 418 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 NFIAQ12857 509 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 EFTUD2Q15029 972 aaKnown RBP eCLIP15.54■□□□□ 0.085e-8■■■■■ 31.8
RRP1B-201ENST00000340648 KCNT1Q5JUK3 1230 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 HHIPL2Q6UWX4 724 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 RSPH3Q86UC2 560 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 PGBD4Q96DM1 585 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 NRBF2Q96F24 287 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 KCNK16Q96T55 309 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 FAM53CQ9NYF3 392 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 KLHL2O95198 593 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 PRKCIP41743 596 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 AUHQ13825 339 aaKnown RBP15.54■□□□□ 0.08
RRP1B-201ENST00000340648 CCNG2Q16589 344 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 Q4G0T1 1027 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 KAT2BQ92831 832 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 DNAJC19Q96DA6 116 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 TMA16Q96EY4 203 aaKnown RBP15.54■□□□□ 0.08
RRP1B-201ENST00000340648 AGBL1Q96MI9 1066 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 TRIM15Q9C019 465 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 SALL4Q9UJQ4 1053 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 PNMA3Q9UL41 463 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 DLG5Q8TDM6 1919 aa15.54■□□□□ 0.08
RRP1B-201ENST00000340648 SPAG6O75602 509 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 KPNB1Q14974 876 aaKnown RBP15.53■□□□□ 0.08
RRP1B-201ENST00000340648 HABP4Q5JVS0 413 aaKnown RBP15.53■□□□□ 0.08
RRP1B-201ENST00000340648 RNF149Q8NC42 400 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 LNX1Q8TBB1 728 aaPredicted RBP15.53■□□□□ 0.08
RRP1B-201ENST00000340648 SCFD2Q8WU76 684 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 LRRC4BQ9NT99 713 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 WARS2Q9UGM6 360 aaKnown RBP15.53■□□□□ 0.08
RRP1B-201ENST00000340648 ZBTB12Q9Y330 459 aaPredicted RBP15.53■□□□□ 0.08
RRP1B-201ENST00000340648 KIAA0391O15091 583 aaKnown RBP15.53■□□□□ 0.08
RRP1B-201ENST00000340648 PROSCO94903 275 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 PAPOLAP51003 745 aaKnown RBP15.53■□□□□ 0.08
RRP1B-201ENST00000340648 SLC12A3P55017 1021 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 ACTR2P61160 394 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 SPDYCQ5MJ68 293 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 PID1Q7Z2X4 250 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 VPS39Q96JC1 886 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 MMTAG2Q9BU76 263 aaKnown RBP15.53■□□□□ 0.08
RRP1B-201ENST00000340648 CHST7Q9NS84 486 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 ATP6V1B1P15313 513 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 BGNP21810 368 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 SNRPFP62306 86 aaKnown RBP15.53■□□□□ 0.08
RRP1B-201ENST00000340648 CUL2Q13617 745 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 PCDHA3Q9Y5H8 950 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 IFT172Q9UG01 1749 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 GSTA4O15217 222 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 CALB2P22676 271 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 ADORA2BP29275 332 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 FAM47CQ5HY64 1035 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 LRRC8EQ6NSJ5 796 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 CCDC117Q8IWD4 279 aaPredicted RBP15.53■□□□□ 0.08
RRP1B-201ENST00000340648 SCUBE1Q8IWY4 988 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 AGAP3Q96P47 875 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 PAK5Q9P286 719 aa15.53■□□□□ 0.08
RRP1B-201ENST00000340648 ATRNO75882 1429 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 FAM86B1E9PN63 330 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 PIK3CDO00329 1044 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 EXTL3O43909 919 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 SEC24DO94855 1032 aaPredicted RBP15.52■□□□□ 0.08
RRP1B-201ENST00000340648 FAM86B2P0C5J1 330 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 ADRA2BP18089 450 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 TCN1P20061 433 aaPredicted RBP15.52■□□□□ 0.08
RRP1B-201ENST00000340648 SERPINB9P50453 376 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 ZCWPW2Q504Y3 356 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 FASTKD1Q53R41 847 aaKnown RBP15.52■□□□□ 0.08
RRP1B-201ENST00000340648 RNF135Q8IUD6 432 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 CMTM5Q96DZ9 223 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 FAM167AQ96KS9 214 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 MARCKSL1P49006 195 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 BAATQ14032 418 aaPredicted RBP15.52■□□□□ 0.08
RRP1B-201ENST00000340648 RASA2Q15283 850 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 PKN2Q16513 984 aaKnown RBP15.52■□□□□ 0.08
RRP1B-201ENST00000340648 ARL13BQ3SXY8 428 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 SEZ6Q53EL9 994 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 SNX30Q5VWJ9 437 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 IZUMO2Q6UXV1 221 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 ARMCX2Q7L311 632 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 APTXQ7Z2E3 356 aaKnown RBP15.52■□□□□ 0.08
RRP1B-201ENST00000340648 CATSPER1Q8NEC5 780 aa15.52■□□□□ 0.08
RRP1B-201ENST00000340648 DGKIO75912 1065 aa15.52■□□□□ 0.07
RRP1B-201ENST00000340648 MAP3K6O95382 1288 aa15.52■□□□□ 0.07
RRP1B-201ENST00000340648 RRP1BQ14684 758 aaKnown RBP15.52■□□□□ 0.07
RRP1B-201ENST00000340648 CLEC16AQ2KHT3 1053 aa15.52■□□□□ 0.07
RRP1B-201ENST00000340648 WDR35Q9P2L0 1181 aa15.52■□□□□ 0.07
RRP1B-201ENST00000340648 ZBTB39O15060 712 aa15.52■□□□□ 0.07
RRP1B-201ENST00000340648 COPAP53621 1224 aa15.52■□□□□ 0.07
RRP1B-201ENST00000340648 PRAMEP78395 509 aa15.52■□□□□ 0.07
RRP1B-201ENST00000340648 OTUD4Q01804 1114 aaKnown RBP15.52■□□□□ 0.07
RRP1B-201ENST00000340648 PRKCEQ02156 737 aa15.52■□□□□ 0.07
RRP1B-201ENST00000340648 EMC2Q15006 297 aa15.52■□□□□ 0.07
RRP1B-201ENST00000340648 Q3C1V9 767 aa15.52■□□□□ 0.07
RRP1B-201ENST00000340648 XKR3Q5GH77 459 aa15.52■□□□□ 0.07
RRP1B-201ENST00000340648 STK32AQ8WU08 396 aa15.52■□□□□ 0.07
RRP1B-201ENST00000340648 TARS2Q9BW92 718 aaKnown RBP15.52■□□□□ 0.07
RRP1B-201ENST00000340648 CCDC78A2IDD5 438 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms